RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 RGS5O15539 181 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 SLC25A17O43808 307 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 IGLV2-23P01705 113 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 PMP2P02689 132 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 RFX2P48378 723 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 CRIP2P52943 208 aaPredicted RBP13.61□□□□□ -0.23
MDC1-206ENST00000489540 RPL23AP62750 156 aaKnown RBP13.61□□□□□ -0.23
MDC1-206ENST00000489540 KCTD9Q7L273 389 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 PPP1R27Q86WC6 154 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 MFSD4AQ8N468 514 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 BORCS5Q969J3 196 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 ISOC1Q96CN7 298 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 CLCC1Q96S66 551 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 SLC5A7Q9GZV3 580 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 CCL28Q9NRJ3 127 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 WSB1Q9Y6I7 421 aa13.61□□□□□ -0.23
MDC1-206ENST00000489540 SRRM4A7MD48 611 aaKnown RBP13.6□□□□□ -0.23
MDC1-206ENST00000489540 H3BMQ9 156 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 CRYZL1O95825 349 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 CRYGBP07316 175 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 PPIFP30405 207 aaKnown RBP13.6□□□□□ -0.23
MDC1-206ENST00000489540 RCVRNP35243 200 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 FXYD4P59646 89 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 HERV-K104P61576 105 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 RPL30P62888 115 aaKnown RBP13.6□□□□□ -0.23
MDC1-206ENST00000489540 EIF4EBP1Q13541 118 aaPredicted RBP13.6□□□□□ -0.23
MDC1-206ENST00000489540 VMA21Q3ZAQ7 101 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 TCTEX1D1Q8N7M0 179 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 TEX45Q8NA69 505 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 OR6F1Q8NGZ6 308 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 DCUN1D5Q9BTE7 237 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 NUBP2Q9Y5Y2 271 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 CEPT1Q9Y6K0 416 aa13.6□□□□□ -0.23
MDC1-206ENST00000489540 G3V318 75 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 CTDSP2O14595 271 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 FCGR3BO75015 233 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 CA2P00918 260 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 PSMB8P28062 276 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 HLA-DMAP28067 261 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 UBE2KP61086 200 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 TMEM65Q6PI78 240 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 MINDY2Q8NBR6 621 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 ABHD5Q8WTS1 349 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 TCTEX1D2Q8WW35 142 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 ZNF2Q9BSG1 426 aaPredicted RBP13.59□□□□□ -0.23
MDC1-206ENST00000489540 MIXL1Q9H2W2 232 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 TAS2R8Q9NYW2 309 aa13.59□□□□□ -0.23
MDC1-206ENST00000489540 PF4P02776 101 aa13.58□□□□□ -0.24
MDC1-206ENST00000489540 RPLP1P05386 114 aaKnown RBP13.58□□□□□ -0.24
MDC1-206ENST00000489540 EGR2P11161 476 aaPredicted RBP13.58□□□□□ -0.24
MDC1-206ENST00000489540 HRH1P35367 487 aa13.58□□□□□ -0.24
MDC1-206ENST00000489540 KIR2DS2P43631 304 aa13.58□□□□□ -0.24
MDC1-206ENST00000489540 NDPQ00604 133 aa13.58□□□□□ -0.24
MDC1-206ENST00000489540 FXYD3Q14802 87 aa13.58□□□□□ -0.24
MDC1-206ENST00000489540 AKIRIN2Q53H80 203 aa13.58□□□□□ -0.24
MDC1-206ENST00000489540 ZNF695Q8IW36 515 aa13.58□□□□□ -0.24
MDC1-206ENST00000489540 OR4S2Q8NH73 311 aa13.58□□□□□ -0.24
MDC1-206ENST00000489540 ABHD1Q96SE0 405 aa13.58□□□□□ -0.24
MDC1-206ENST00000489540 NUDT19A8MXV4 375 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 CNIH1O95406 144 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 IGLV1-40P01703 118 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 CDX1P47902 265 aaPredicted RBP13.57□□□□□ -0.24
MDC1-206ENST00000489540 ACTBL2Q562R1 376 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 TMEM17Q86X19 198 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 LAX1Q8IWV1 398 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 WFDC9Q8NEX5 89 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 ARPC1AQ92747 370 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 MOB3AQ96BX8 217 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 TPSG1Q9NRR2 321 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 RABL2AQ9UBK7 228 aaPredicted RBP13.57□□□□□ -0.24
MDC1-206ENST00000489540 RABL2BQ9UNT1 228 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 FBXO7Q9Y3I1 522 aa13.57□□□□□ -0.24
MDC1-206ENST00000489540 CCDC160A6NGH7 325 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 TNFSF12O43508 249 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 GNRHRP30968 328 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 TSPAN5P62079 268 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 MRPS10P82664 201 aaKnown RBP13.56□□□□□ -0.24
MDC1-206ENST00000489540 CATR1Q13166 79 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 ECSCRQ19T08 205 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 C19orf54Q5BKX5 351 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 KLHL30-AS1Q8NEE0 82 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 FCAMRQ8WWV6 532 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 AIFM2Q9BRQ8 373 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 KLK11Q9UBX7 282 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 MTFP1Q9UDX5 166 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 FOXA2Q9Y261 457 aaPredicted RBP13.56□□□□□ -0.24
MDC1-206ENST00000489540 A3GALT2U3KPV4 340 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 PKD1L1Q8TDX9 2849 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 ARPC1BO15143 372 aaKnown RBP13.56□□□□□ -0.24
MDC1-206ENST00000489540 CREBL2O60519 120 aaPredicted RBP13.56□□□□□ -0.24
MDC1-206ENST00000489540 CD40LGP29965 261 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 MYCNOSP40205 109 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 RAB9AP51151 201 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 GNB1P62873 340 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 PJVKQ0ZLH3 352 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 PRSS8Q16651 343 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 OR2B11Q5JQS5 317 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 VAX1Q5SQQ9 334 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 LPCAT3Q6P1A2 487 aa13.56□□□□□ -0.24
MDC1-206ENST00000489540 UNQ5815/PRO19632Q6UWF5 114 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms