RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 BICRAQ9NZM4 1560 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 ERCC6Q03468 1493 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 NEO1Q92859 1461 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 A0A087WX48 190 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 A8MUN3 132 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 A8MWL6 223 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 B4DEV8 164 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 LST1O00453 97 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 SCO1O75880 301 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 C8GP07360 202 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 TFPTP0C1Z6 253 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 ZNF688P0C7X2 276 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 CPMP14384 443 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 OPRM1P35372 400 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 CA7P43166 264 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 LHX2P50458 406 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 CMC4P56277 68 aaPredicted RBP2.29□□□□□ -2.04
PRPF4-203ENST00000488937 FGF12P61328 243 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 NCALDP61601 193 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 FABP9Q0Z7S8 132 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 C15orf32Q32M92 178 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 SP6Q3SY56 376 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 ZNF678Q5SXM1 525 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 FAM104BQ5XKR9 115 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 C1orf174Q8IYL3 243 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 ANKRD29Q8N6D5 301 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 ZNF283Q8N7M2 679 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 OR13C8Q8NGS7 320 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 OR5J2Q8NH18 312 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 SGMS2Q8NHU3 365 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 MAL2Q969L2 176 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 EXOSC8Q96B26 276 aaKnown RBP2.29□□□□□ -2.04
PRPF4-203ENST00000488937 PLEKHB2Q96CS7 222 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 GNPNAT1Q96EK6 184 aaPredicted RBP2.29□□□□□ -2.04
PRPF4-203ENST00000488937 LYSMD1Q96S90 227 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 GPER1Q99527 375 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 NRTNQ99748 197 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 HDHD3Q9BSH5 251 aaPredicted RBP2.29□□□□□ -2.04
PRPF4-203ENST00000488937 CHST6Q9GZX3 395 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 PDFQ9HBH1 243 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 ZNF286AQ9HBT8 521 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 HMG20AQ9NP66 347 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 TMEM38BQ9NVV0 291 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 MED29Q9NX70 200 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 SLC23A2Q9UGH3 650 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 SMAD5-AS1Q9Y6J3 95 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 TDRD6O60522 2096 aaKnown RBP2.29□□□□□ -2.04
PRPF4-203ENST00000488937 DSCAMO60469 2012 aa2.29□□□□□ -2.04
PRPF4-203ENST00000488937 COL27A1Q8IZC6 1860 aaPredicted RBP2.28□□□□□ -2.04
PRPF4-203ENST00000488937 ADGBQ8N7X0 1667 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 REREQ9P2R6 1566 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 ARHGAP23Q9P227 1491 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 IGHV3-49A0A0A0MS15 119 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 IGHV3-43A0A0B4J1X8 118 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 IGKV1-12A0A0C4DH73 117 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 A0A1W2PQ67 120 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 NKX2-6A6NCS4 301 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 G3V2T6 193 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 H7C1C5 153 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 HMGB3O15347 200 aaKnown RBP2.28□□□□□ -2.04
PRPF4-203ENST00000488937 IGKV1D-12P01611 117 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 LCN6P62502 163 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 RPS28P62857 69 aaKnown RBP2.28□□□□□ -2.04
PRPF4-203ENST00000488937 HOXC5Q00444 222 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 CAV1Q03135 178 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 ENDOGQ14249 297 aaKnown RBP2.28□□□□□ -2.04
PRPF4-203ENST00000488937 PDGFRLQ15198 375 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 CST6Q15828 149 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 TNFAIP8L3Q5GJ75 292 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 FAM78AQ5JUQ0 283 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 SAMD13Q5VXD3 122 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 SGPP2Q8IWX5 399 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 TMEM256Q8N2U0 113 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 LRRC18Q8N456 261 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 SLC22A24Q8N4F4 322 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 OR8J3Q8NGG0 315 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 RHOXF1Q8NHV9 184 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 CIRBP-AS1Q8TBR5 109 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 PDXPQ96GD0 296 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 ERMAPQ96PL5 475 aaPredicted RBP2.28□□□□□ -2.04
PRPF4-203ENST00000488937 SERPINI1Q99574 410 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 EFCAB11Q9BUY7 163 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 RSPO3Q9BXY4 272 aaPredicted RBP2.28□□□□□ -2.04
PRPF4-203ENST00000488937 PBOV1Q9GZY1 135 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 TMEM138Q9NPI0 162 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 ZNF331Q9NQX6 463 aaPredicted RBP2.28□□□□□ -2.04
PRPF4-203ENST00000488937 AK3Q9UIJ7 227 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 SSR3Q9UNL2 185 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 ATG2BQ96BY7 2078 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 MAST2Q6P0Q8 1798 aa2.28□□□□□ -2.04
PRPF4-203ENST00000488937 SMARCA2P51531 1590 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 WDR7Q9Y4E6 1490 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 TONSLQ96HA7 1378 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 hCG_1818297A0A087WSY0 165 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 TRAV4A0A0B4J268 109 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 IZUMO1RA6ND01 250 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 A8MT66 165 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 E7EQ34 232 aa2.27□□□□□ -2.05
PRPF4-203ENST00000488937 AIPO00170 330 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms