RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 GSTP1P09211 210 aaKnown RBP9.54□□□□□ -0.88
SDC3-204ENST00000487984 EGR2P11161 476 aaPredicted RBP9.54□□□□□ -0.88
SDC3-204ENST00000487984 ELK1P19419 428 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 CD40LGP29965 261 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 ECI1P42126 302 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 ZNF616Q08AN1 781 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 ARL6IP1Q15041 203 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 CNIH2Q6PI25 160 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 DRAXINQ8NBI3 349 aaPredicted RBP9.54□□□□□ -0.88
SDC3-204ENST00000487984 CASTOR1Q8WTX7 329 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 ALX4Q9H161 411 aaPredicted RBP9.54□□□□□ -0.88
SDC3-204ENST00000487984 ATG5Q9H1Y0 275 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 AKIP1Q9NQ31 210 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 GAB2Q9UQC2 676 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 TENM3Q9P273 2699 aa9.54□□□□□ -0.88
SDC3-204ENST00000487984 KMT2CQ8NEZ4 4911 aaKnown RBP9.53□□□□□ -0.88
SDC3-204ENST00000487984 A0A1W2PN81 502 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 TRDCB7Z8K6 153 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 IGKV1-16P04430 117 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 EIF4EP06730 217 aaKnown RBP9.53□□□□□ -0.88
SDC3-204ENST00000487984 CHRNA7P36544 502 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 PPP5CP53041 499 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 LINC00205P59089 165 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 MRPS10P82664 201 aaKnown RBP9.53□□□□□ -0.88
SDC3-204ENST00000487984 IL18Q14116 193 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 PSG5Q15238 335 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 TMEM69Q5SWH9 247 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 PYHIN1Q6K0P9 492 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 GDPD1Q8N9F7 314 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 ZNF383Q8NA42 475 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 ABHD5Q8WTS1 349 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 BORCS5Q969J3 196 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 SLC25A38Q96DW6 304 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 CLCC1Q96S66 551 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 RNF5Q99942 180 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 RDH8Q9NYR8 311 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 METTL1Q9UBP6 276 aaKnown RBP9.53□□□□□ -0.88
SDC3-204ENST00000487984 ZNF221Q9UK13 617 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 FOXA2Q9Y261 457 aaPredicted RBP9.53□□□□□ -0.88
SDC3-204ENST00000487984 KCNK7Q9Y2U2 307 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 LSM4Q9Y4Z0 139 aaKnown RBP9.53□□□□□ -0.88
SDC3-204ENST00000487984 NUBP2Q9Y5Y2 271 aa9.53□□□□□ -0.88
SDC3-204ENST00000487984 XRCC3O43542 346 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 CD3GP09693 182 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 MOGAT2Q3SYC2 334 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 PYDC2Q56P42 97 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 NBEAL2Q6ZNJ1 2754 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 PPP1R27Q86WC6 154 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 MFSD4AQ8N468 514 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 TCTEX1D1Q8N7M0 179 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 OR4A4PQ8NGN8 299 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 DCUN1D4Q92564 292 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 FAM103A1Q9BTL3 118 aaKnown RBP9.52□□□□□ -0.89
SDC3-204ENST00000487984 CCDC32Q9BV29 185 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 TOLLIPQ9H0E2 274 aa9.52□□□□□ -0.89
SDC3-204ENST00000487984 M0R1X1 148 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 FABP7O15540 132 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 SPDEFO95238 335 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 CA2P00918 260 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 FCGR3AP08637 254 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 LGALS1P09382 135 aaKnown RBP9.51□□□□□ -0.89
SDC3-204ENST00000487984 INSL3P51460 131 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 RPS16P62249 146 aaKnown RBP9.51□□□□□ -0.89
SDC3-204ENST00000487984 MRPS15P82914 257 aaKnown RBP9.51□□□□□ -0.89
SDC3-204ENST00000487984 TMEM267Q0VDI3 215 aaPredicted RBP9.51□□□□□ -0.89
SDC3-204ENST00000487984 AKIRIN2Q53H80 203 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 ACTBL2Q562R1 376 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 IGSF11Q5DX21 431 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 UNQ5815/PRO19632Q6UWF5 114 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 ZNF562Q6V9R5 426 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 PDPNQ86YL7 162 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 RAB3CQ96E17 227 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 TSNAXQ99598 290 aaKnown RBP9.51□□□□□ -0.89
SDC3-204ENST00000487984 CABLES2Q9BTV7 478 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 PALMDQ9NP74 551 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 TPSG1Q9NRR2 321 aa9.51□□□□□ -0.89
SDC3-204ENST00000487984 ZNF256Q9Y2P7 627 aaPredicted RBP9.51□□□□□ -0.89
SDC3-204ENST00000487984 MRPS7Q9Y2R9 242 aaKnown RBP9.51□□□□□ -0.89
SDC3-204ENST00000487984 LINC01619G3V211 115 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 MFNGO00587 321 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 OVOL1O14753 267 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 BET1O15155 118 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 SLC25A17O43808 307 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 IGHV3-11P01762 117 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 APOA2P02652 100 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 GNB3P16520 340 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 SLURP1P55000 103 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 ZNF429Q86V71 674 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.5□□□□□ -0.89
SDC3-204ENST00000487984 LFNGQ8NES3 379 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 OR10R2Q8NGX6 335 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 MAFIPQ8WZ33 124 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 ARPC1AQ92747 370 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 DLX4Q92988 240 aaPredicted RBP9.5□□□□□ -0.89
SDC3-204ENST00000487984 FLYWCH2Q96CP2 140 aaKnown RBP9.5□□□□□ -0.89
SDC3-204ENST00000487984 C5orf30Q96GV9 206 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 WWC2-AS2Q96NR7 200 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 MS4A10Q96PG2 267 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 SOSTQ9BQB4 213 aa9.5□□□□□ -0.89
SDC3-204ENST00000487984 OR2D2Q9H210 308 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms