RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ODF3BA8MYP8 253 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 RNF223E7ERA6 249 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 H0YIZ8 118 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 LY6LH3BQJ8 138 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 RBFOX2O43251 390 aaKnown RBP eCLIP11.69□□□□□ -0.54
COL9A1-207ENST00000486080 MPC2O95563 127 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 CRYZL1O95825 349 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 KIR2DS2P43631 304 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 FAM71F2Q6NXP2 309 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 TGIF2LXQ8IUE1 241 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 FOXRED2Q8IWF2 684 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 VKORC1L1Q8N0U8 176 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 OR4D5Q8NGN0 318 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 LSM10Q969L4 123 aaKnown RBP11.69□□□□□ -0.54
COL9A1-207ENST00000486080 RRNAD1Q96FB5 475 aaKnown RBP11.69□□□□□ -0.54
COL9A1-207ENST00000486080 PLEKHA2Q9HB19 425 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
COL9A1-207ENST00000486080 PRRC2AP48634 2157 aaKnown RBP11.68□□□□□ -0.54
COL9A1-207ENST00000486080 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.68□□□□□ -0.54
COL9A1-207ENST00000486080 FXYD6-FXYD2A0A087WZ82 144 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 H0YJW9 148 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 SCGB1D2O95969 90 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 HPRT1P00492 218 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 MBPP02686 304 aaPredicted RBP11.68□□□□□ -0.54
COL9A1-207ENST00000486080 IGKV1-16P04430 117 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 P0C879 139 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 S100A10P60903 97 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 PAX8Q06710 450 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 LAMTOR1Q6IAA8 161 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 LHFPL4Q7Z7J7 247 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 OR4S2Q8NH73 311 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 R3HDM4Q96D70 268 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 RNF126Q9BV68 326 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 SLC35D1Q9NTN3 355 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 CACNG5Q9UF02 275 aa11.68□□□□□ -0.54
COL9A1-207ENST00000486080 NXPH3O95157 252 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 MSMBP08118 114 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 PAX6P26367 422 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 FGL1Q08830 312 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 CXorf66Q5JRM2 361 aaPredicted RBP11.67□□□□□ -0.54
COL9A1-207ENST00000486080 C11orf87Q6NUJ2 197 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 SSX9Q7RTT3 188 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 OR5AN1Q8NGI8 311 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 LHX4Q969G2 390 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 Q96MF0 132 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 SPIN2AQ99865 258 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 SPIN2BQ9BPZ2 258 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 PLSCR3Q9NRY6 295 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 OR5AC2Q9NZP5 309 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 MBD2Q9UBB5 411 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 AMMECR1Q9Y4X0 333 aaPredicted RBP11.67□□□□□ -0.54
COL9A1-207ENST00000486080 MMP24Q9Y5R2 645 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 ZANQ9Y493 2812 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 CCDC168Q8NDH2 2452 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 IGHV3-72A0A0B4J1Y9 119 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 PIGBOS1A0A0B4J2F0 54 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 A0A1B0GU03 582 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 MARCH11A6NNE9 402 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 H7C2Y5 167 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 KCNAB3O43448 404 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 HTR1DP28221 377 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 RTL8BQ17RB0 113 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 THOC7Q6I9Y2 204 aaKnown RBP11.67□□□□□ -0.54
COL9A1-207ENST00000486080 C9orf62Q8N4C0 152 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 REG4Q9BYZ8 158 aa11.67□□□□□ -0.54
COL9A1-207ENST00000486080 LSM5Q9Y4Y9 91 aaKnown RBP11.67□□□□□ -0.54
COL9A1-207ENST00000486080 IGHV1-3A0A0C4DH29 117 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 B4DSR2 109 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 PITX3O75364 302 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 APOA2P02652 100 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 GAPDHP04406 335 aaKnown RBP11.66□□□□□ -0.54
COL9A1-207ENST00000486080 LOXL1Q08397 574 aaPredicted RBP11.66□□□□□ -0.54
COL9A1-207ENST00000486080 SMCO1Q147U7 214 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 LGALSLQ3ZCW2 172 aaPredicted RBP11.66□□□□□ -0.54
COL9A1-207ENST00000486080 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 OR1S1Q8NH92 325 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 THAP6Q8TBB0 222 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 C17orf50Q8WW18 174 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 RPEQ96AT9 228 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 C1orf159Q96HA4 380 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 MAGT1Q9H0U3 335 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 DPM3Q9P2X0 92 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 HILPDAQ9Y5L2 63 aa11.66□□□□□ -0.54
COL9A1-207ENST00000486080 ITPR3Q14573 2671 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 SRRM4A7MD48 611 aaKnown RBP11.65□□□□□ -0.54
COL9A1-207ENST00000486080 LEUTXA8MZ59 168 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 K7EPK0 472 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 ARPC5O15511 151 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 ATG12O94817 140 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 SLC25A4P12235 298 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 SLC25A6P12236 298 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 NQO2P16083 231 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 PRSS57Q6UWY2 283 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 H2BFWTQ7Z2G1 175 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 FAM71E2Q8N5Q1 922 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 DMBX1Q8NFW5 382 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 HIF1ANQ9NWT6 349 aa11.65□□□□□ -0.54
COL9A1-207ENST00000486080 TET2Q6N021 2002 aaPredicted RBP11.65□□□□□ -0.54
COL9A1-207ENST00000486080 HMSDA8MTL9 139 aa11.65□□□□□ -0.55
COL9A1-207ENST00000486080 OR9G9P0C7N8 305 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms