RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ARPC1BO15143 372 aaKnown RBP13.72□□□□□ -0.21
COL6A1-204ENST00000486023 SPDEFO95238 335 aa13.72□□□□□ -0.21
COL6A1-204ENST00000486023 DIRAS3O95661 229 aa13.72□□□□□ -0.21
COL6A1-204ENST00000486023 CRYZL1O95825 349 aa13.72□□□□□ -0.21
COL6A1-204ENST00000486023 APELAP0DMC3 54 aa13.72□□□□□ -0.21
COL6A1-204ENST00000486023 DUTP33316 252 aaKnown RBP13.72□□□□□ -0.21
COL6A1-204ENST00000486023 LGALS7P47929 136 aa13.72□□□□□ -0.21
COL6A1-204ENST00000486023 TPPP2P59282 170 aa13.72□□□□□ -0.21
COL6A1-204ENST00000486023 OR2W1Q9Y3N9 320 aa13.72□□□□□ -0.21
COL6A1-204ENST00000486023 MEIS3P1A6NDR6 274 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 SRRM4A7MD48 611 aaKnown RBP13.71□□□□□ -0.21
COL6A1-204ENST00000486023 FCGR3BO75015 233 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 IGLV2-23P01705 113 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 RRASP10301 218 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 RPS19P39019 145 aaKnown RBP13.71□□□□□ -0.21
COL6A1-204ENST00000486023 TAGLNQ01995 201 aaKnown RBP13.71□□□□□ -0.21
COL6A1-204ENST00000486023 ZNF616Q08AN1 781 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 AKIRIN2Q53H80 203 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 IDO2Q6ZQW0 420 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 ZNF645Q8N7E2 425 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 TCTEX1D1Q8N7M0 179 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 MYOZ3Q8TDC0 251 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 YIPF6Q96EC8 236 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 ADTRPQ96IZ2 230 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 PHB2Q99623 299 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 SPATA2Q9UM82 520 aa13.71□□□□□ -0.21
COL6A1-204ENST00000486023 IGKV1D-13A0A0B4J2D9 117 aa13.7□□□□□ -0.22
COL6A1-204ENST00000486023 I3L521 148 aa13.7□□□□□ -0.22
COL6A1-204ENST00000486023 TRGV3P03979 118 aa13.7□□□□□ -0.22
COL6A1-204ENST00000486023 IGKV1-13P0DP09 117 aa13.7□□□□□ -0.22
COL6A1-204ENST00000486023 DGCR2P98153 550 aa13.7□□□□□ -0.22
COL6A1-204ENST00000486023 EGFEM1PQ0D2K5 195 aa13.7□□□□□ -0.22
COL6A1-204ENST00000486023 VMA21Q3ZAQ7 101 aa13.7□□□□□ -0.22
COL6A1-204ENST00000486023 TMEM177Q53S58 311 aa13.7□□□□□ -0.22
COL6A1-204ENST00000486023 C19orf54Q5BKX5 351 aa13.7□□□□□ -0.22
COL6A1-204ENST00000486023 C9orf66Q5T8R8 295 aa13.7□□□□□ -0.22
COL6A1-204ENST00000486023 BEST4Q8NFU0 473 aa13.7□□□□□ -0.22
COL6A1-204ENST00000486023 S100A16Q96FQ6 103 aaKnown RBP13.7□□□□□ -0.22
COL6A1-204ENST00000486023 HLA-DQB1P01920 261 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 OR8U8P0C7N1 319 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 FCGR2CP31995 323 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 ECI1P42126 302 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 CRIP2P52943 208 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-204ENST00000486023 SLURP1P55000 103 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 SCAND1P57086 179 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 PYHIN1Q6K0P9 492 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 KCTD9Q7L273 389 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 ACOT12Q8WYK0 555 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 GPHA2Q96T91 129 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 AUNIPQ9H7T9 357 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 TAS2R8Q9NYW2 309 aa13.69□□□□□ -0.22
COL6A1-204ENST00000486023 RBMX2Q9Y388 322 aaKnown RBP13.69□□□□□ -0.22
COL6A1-204ENST00000486023 IGHV4OR15-8A0A075B7B6 117 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 A0A087WW49 117 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 TNFSF12O43508 249 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 CRYGBP07316 175 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 RPL30P62888 115 aaKnown RBP13.68□□□□□ -0.22
COL6A1-204ENST00000486023 FHL3Q13643 280 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 TNXAQ16473 311 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 ASPHD1Q5U4P2 390 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 CROCCP3Q8IVE0 287 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 SAMD12Q8N8I0 201 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 SECTM1Q8WVN6 248 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 TCTEX1D2Q8WW35 142 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 DDB2Q92466 427 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 DCUN1D4Q92564 292 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 COA4Q9NYJ1 87 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 PRELID3BQ9Y3B1 194 aa13.68□□□□□ -0.22
COL6A1-204ENST00000486023 MSGN1A6NI15 193 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 LINC01619G3V211 115 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 MPPED1O15442 326 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 AADACP22760 399 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 FXYD4P59646 89 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 NCS1P62166 190 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 SSBP2P81877 361 aaPredicted RBP13.67□□□□□ -0.22
COL6A1-204ENST00000486023 RUNX1Q01196 453 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 DEFA5Q01523 94 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 HOGA1Q86XE5 327 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 PRR25Q96S07 402 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 IFT46Q9NQC8 304 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 CCL28Q9NRJ3 127 aa13.67□□□□□ -0.22
COL6A1-204ENST00000486023 ZMAT5Q9UDW3 170 aaKnown RBP13.67□□□□□ -0.22
COL6A1-204ENST00000486023 A0A0A6YYH2 397 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 C13orf42A0A1B0GVH6 325 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 A6NJ64 397 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 OVOL1O14753 267 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 SLC22A5O76082 557 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 ACTL6BO94805 426 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 LY86O95711 162 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 LGALS1P09382 135 aaKnown RBP13.66□□□□□ -0.22
COL6A1-204ENST00000486023 UBE2KP61086 200 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 VBP1P61758 197 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 UBE2NLQ5JXB2 153 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 TMEM69Q5SWH9 247 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 VKORC1L1Q8N0U8 176 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 TEX45Q8NA69 505 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 POC5Q8NA72 575 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 DLX4Q92988 240 aaPredicted RBP13.66□□□□□ -0.22
COL6A1-204ENST00000486023 FUNDC2Q9BWH2 189 aa13.66□□□□□ -0.22
COL6A1-204ENST00000486023 SLA2Q9H6Q3 261 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms