RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 STPG2Q8N412 459 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 COMMD1Q8N668 190 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 OR10J5Q8NHC4 309 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 GPX8Q8TED1 209 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 ACOT12Q8WYK0 555 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 PHF21AQ96BD5 680 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 ZNF414Q96IQ9 312 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 CITED2Q99967 270 aaPredicted RBP4.47□□□□□ -1.69
CUX1-208ENST00000485792 MRPS26Q9BYN8 205 aaKnown RBP4.47□□□□□ -1.69
CUX1-208ENST00000485792 VCX3AQ9NNX9 186 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 ZFP57Q9NU63 452 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 SDHAF2Q9NX18 166 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 LINC00527Q9UJ94 153 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 KLK9Q9UKQ9 250 aa4.47□□□□□ -1.69
CUX1-208ENST00000485792 TRAV18A0A075B6X5 111 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 AP4M1O00189 453 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 FCN1O00602 326 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 RRHO14718 337 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 SLC22A5O76082 557 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 ELANEP08246 267 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 OR8U9P0C7N5 309 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 VSIG10L2P0DP72 767 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 SOX6P35712 828 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 CBX5P45973 191 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 CDX1P47902 265 aaPredicted RBP4.46□□□□□ -1.7
CUX1-208ENST00000485792 LGALS7P47929 136 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 TMBIM6P55061 237 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 RUNX1Q01196 453 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 DEFA5Q01523 94 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 FOXE3Q13461 319 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 FHL3Q13643 280 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 SPCS2Q15005 226 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 AKIRIN2Q53H80 203 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 FAM131AQ6UXB0 335 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 ZNF562Q6V9R5 426 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 C19orf35Q6ZS72 473 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 SLC35E3Q7Z769 313 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 ZNF645Q8N7E2 425 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 GVQW1Q8N7I0 195 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 DRAXINQ8NBI3 349 aaPredicted RBP4.46□□□□□ -1.7
CUX1-208ENST00000485792 BEST4Q8NFU0 473 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 OR5AP2Q8NGF4 316 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 OR8U1Q8NH10 309 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 DYNC2LI1Q8TCX1 351 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 GIMAP1Q8WWP7 306 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 S100A16Q96FQ6 103 aaKnown RBP4.46□□□□□ -1.7
CUX1-208ENST00000485792 P2RX4Q99571 388 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 SOSTQ9BQB4 213 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 NXF2Q9GZY0 626 aaKnown RBP4.46□□□□□ -1.7
CUX1-208ENST00000485792 RBM38Q9H0Z9 239 aaKnown RBP4.46□□□□□ -1.7
CUX1-208ENST00000485792 MIXL1Q9H2W2 232 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 OR51J1Q9H342 316 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 CHMP1AQ9HD42 196 aaPredicted RBP4.46□□□□□ -1.7
CUX1-208ENST00000485792 DIABLOQ9NR28 239 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 RNF150Q9ULK6 438 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 WASHC3Q9Y3C0 194 aa4.46□□□□□ -1.7
CUX1-208ENST00000485792 TSSC4Q9Y5U2 329 aaPredicted RBP4.46□□□□□ -1.7
CUX1-208ENST00000485792 STARD9Q9P2P6 4700 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 DNAH7Q8WXX0 4024 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 A0A075B6Q4 140 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 PSMB11A5LHX3 300 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 I3L521 148 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 SULT1C2O00338 296 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 ARPC1BO15143 372 aaKnown RBP4.45□□□□□ -1.7
CUX1-208ENST00000485792 BET1O15155 118 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 HSPA12AO43301 675 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 FCER2P06734 321 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 FGF2P09038 288 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 CSF1P09603 554 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 RRASP10301 218 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 ZNF182P17025 639 aaPredicted RBP4.45□□□□□ -1.7
CUX1-208ENST00000485792 ELK1P19419 428 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 RPL5P46777 297 aaKnown RBP4.45□□□□□ -1.7
CUX1-208ENST00000485792 RORCP51449 518 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 TAS2R20P59543 309 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 RPL23AP62750 156 aaKnown RBP4.45□□□□□ -1.7
CUX1-208ENST00000485792 RPL30P62888 115 aaKnown RBP4.45□□□□□ -1.7
CUX1-208ENST00000485792 CX3CL1P78423 397 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 DYRK1AQ13627 763 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 ARFRP1Q13795 201 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 HES1Q14469 280 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 PSG5Q15238 335 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 MMDQ15546 238 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 POU2AF1Q16633 256 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 BEAN1Q3B7T3 259 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 LIN54Q6MZP7 749 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 TEX38Q6PEX7 206 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 TEPPQ6URK8 271 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 CENPVQ7Z7K6 275 aaPredicted RBP4.45□□□□□ -1.7
CUX1-208ENST00000485792 ZNF329Q86UD4 541 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 C1QL4Q86Z23 238 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 FOXRED2Q8IWF2 684 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 SAMD12Q8N8I0 201 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 ZBTB34Q8NCN2 500 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 SETD6Q8TBK2 473 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 MRGPRFQ96AM1 343 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 ADTRPQ96IZ2 230 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 RASL11BQ9BPW5 248 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 OR2D2Q9H210 308 aa4.45□□□□□ -1.7
CUX1-208ENST00000485792 SCPEP1Q9HB40 452 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms