RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 GNB3P16520 340 aa13.16□□□□□ -0.3
SMC4-216ENST00000485645 SSBP2P81877 361 aaPredicted RBP13.16□□□□□ -0.3
SMC4-216ENST00000485645 SRSF7Q16629 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
SMC4-216ENST00000485645 RSRP1Q9BUV0 290 aa13.16□□□□□ -0.3
SMC4-216ENST00000485645 ZMAT4Q9H898 229 aa13.16□□□□□ -0.3
SMC4-216ENST00000485645 A0A075B6Q4 140 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 IFITM5A6NNB3 132 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 RRASP10301 218 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 RAB6AP20340 208 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 OR10A3P58181 314 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 RTL8BQ17RB0 113 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 TMEM177Q53S58 311 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 HAPLN4Q86UW8 402 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 ANKRD13BQ86YJ7 626 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 BVESQ8NE79 360 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 MUC7Q8TAX7 377 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 MAFIPQ8WZ33 124 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 GINS4Q9BRT9 223 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 CENPOQ9BU64 300 aa13.15□□□□□ -0.3
SMC4-216ENST00000485645 ZNF230Q9UIE0 474 aaPredicted RBP13.15□□□□□ -0.3
SMC4-216ENST00000485645 SHISA3A0PJX4 238 aa13.14□□□□□ -0.31
SMC4-216ENST00000485645 ANKRD34BA5PLL1 514 aa13.14□□□□□ -0.31
SMC4-216ENST00000485645 METTL21EPA6NDL7 271 aa13.14□□□□□ -0.31
SMC4-216ENST00000485645 RAB27BO00194 218 aa13.14□□□□□ -0.31
SMC4-216ENST00000485645 MFNGO00587 321 aa13.14□□□□□ -0.31
SMC4-216ENST00000485645 IGLV1-51P01701 117 aa13.14□□□□□ -0.31
SMC4-216ENST00000485645 HIST1H1DP16402 221 aaKnown RBP13.14□□□□□ -0.31
SMC4-216ENST00000485645 MYL9P24844 172 aa13.14□□□□□ -0.31
SMC4-216ENST00000485645 FGF9P31371 208 aaPredicted RBP13.14□□□□□ -0.31
SMC4-216ENST00000485645 TALDO1P37837 337 aa13.14□□□□□ -0.31
SMC4-216ENST00000485645 C22orf42Q6IC83 251 aa13.14□□□□□ -0.31
SMC4-216ENST00000485645 C5orf30Q96GV9 206 aa13.14□□□□□ -0.31
SMC4-216ENST00000485645 TINAGL1Q9GZM7 467 aaPredicted RBP13.14□□□□□ -0.31
SMC4-216ENST00000485645 SRRM4A7MD48 611 aaKnown RBP13.13□□□□□ -0.31
SMC4-216ENST00000485645 BRI3O95415 125 aa13.13□□□□□ -0.31
SMC4-216ENST00000485645 RAB3BP20337 219 aa13.13□□□□□ -0.31
SMC4-216ENST00000485645 AADACP22760 399 aa13.13□□□□□ -0.31
SMC4-216ENST00000485645 ARFRP1Q13795 201 aa13.13□□□□□ -0.31
SMC4-216ENST00000485645 ADTRPQ96IZ2 230 aa13.13□□□□□ -0.31
SMC4-216ENST00000485645 PHB2Q99623 299 aa13.13□□□□□ -0.31
SMC4-216ENST00000485645 TXNL4BQ9NX01 149 aaKnown RBP13.13□□□□□ -0.31
SMC4-216ENST00000485645 COA4Q9NYJ1 87 aa13.13□□□□□ -0.31
SMC4-216ENST00000485645 DUTP33316 252 aaKnown RBP13.12□□□□□ -0.31
SMC4-216ENST00000485645 KLF5Q13887 457 aaPredicted RBP13.12□□□□□ -0.31
SMC4-216ENST00000485645 NEDD8Q15843 81 aa13.12□□□□□ -0.31
SMC4-216ENST00000485645 VMA21Q3ZAQ7 101 aa13.12□□□□□ -0.31
SMC4-216ENST00000485645 CASC10Q5T4H9 136 aa13.12□□□□□ -0.31
SMC4-216ENST00000485645 Q6ZS49 121 aa13.12□□□□□ -0.31
SMC4-216ENST00000485645 TEX45Q8NA69 505 aa13.12□□□□□ -0.31
SMC4-216ENST00000485645 OR9G4Q8NGQ1 327 aa13.12□□□□□ -0.31
SMC4-216ENST00000485645 USMG5Q96IX5 58 aa13.12□□□□□ -0.31
SMC4-216ENST00000485645 PEF1Q9UBV8 284 aaKnown RBP13.12□□□□□ -0.31
SMC4-216ENST00000485645 SSR3Q9UNL2 185 aa13.12□□□□□ -0.31
SMC4-216ENST00000485645 TNCP24821 2201 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 A0A0B4J203 849 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 MSGN1A6NI15 193 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 APELAP0DMC3 54 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 IGHV4-30-4P0DP06 118 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 UBE2KP61086 200 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 DEFA5Q01523 94 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 ARL6IP1Q15041 203 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 TNXAQ16473 311 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 TATDN3Q17R31 274 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 ZNF343Q6P1L6 599 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 SGPP2Q8IWX5 399 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 H1FOOQ8IZA3 346 aaPredicted RBP13.11□□□□□ -0.31
SMC4-216ENST00000485645 Q8N1Y9 231 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 DDB2Q92466 427 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 ATG5Q9H1Y0 275 aa13.11□□□□□ -0.31
SMC4-216ENST00000485645 DYNC2H1Q8NCM8 4307 aaKnown RBP13.11□□□□□ -0.31
SMC4-216ENST00000485645 LINC00473A8K010 186 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 H0Y980 276 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 TNFAIP8O95379 198 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 CRYZL1O95825 349 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 DTYMKP23919 212 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 SYNJ2BPP57105 145 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 DYRK1AQ13627 763 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 PRSS8Q16651 343 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 MRGPRG-AS1Q2M3A8 158 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 IDO2Q6ZQW0 420 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 NR2C2APQ86WQ0 139 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 OSR1Q8TAX0 266 aaPredicted RBP13.1□□□□□ -0.31
SMC4-216ENST00000485645 OR51E2Q9H255 320 aa13.1□□□□□ -0.31
SMC4-216ENST00000485645 IGKV1D-8A0A087WSZ0 117 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 A0A087WXM4 84 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 A8MZ25 164 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 MPPED1O15442 326 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 RPEL1Q2QD12 228 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 CDNFQ49AH0 187 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 IL34Q6ZMJ4 242 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 TPRA1Q86W33 373 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 ADAD2Q8NCV1 583 aaKnown RBP13.09□□□□□ -0.31
SMC4-216ENST00000485645 TSPAN14Q8NG11 270 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 SRSF12Q8WXF0 261 aaKnown RBP13.09□□□□□ -0.31
SMC4-216ENST00000485645 ACOT12Q8WYK0 555 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 TM2D3Q9BRN9 247 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 C19orf73Q9NVV2 129 aa13.09□□□□□ -0.31
SMC4-216ENST00000485645 ELF5Q9UKW6 265 aaPredicted RBP13.09□□□□□ -0.31
SMC4-216ENST00000485645 J3QRK9 145 aa13.08□□□□□ -0.32
SMC4-216ENST00000485645 TRBV12-3P01733 135 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms