RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 TBC1D24Q9ULP9 559 aa4.44□□□□□ -1.7
NHLRC3-205ENST00000485407 RYR2Q92736 4967 aa4.44□□□□□ -1.7
NHLRC3-205ENST00000485407 IGHV3OR15-7A0A075B7D8 119 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 A0A087WXM4 84 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 FUOMA2VDF0 154 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 TEX46H3BTG2 121 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 K7N7A8 449 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 CCRL2O00421 344 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 PIN1P1O15428 100 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 TNFSF12O43508 249 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 TOMM40O96008 361 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 CSN2P05814 226 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 UCHL1P09936 223 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 PRKACAP17612 351 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 ERP29P30040 261 aaKnown RBP4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 FGF9P31371 208 aaPredicted RBP4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 KCNJ3P48549 501 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 RAB9AP51151 201 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 FGF12P61328 243 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 LCN2P80188 198 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 PAX5Q02548 391 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 MEF2CQ06413 473 aaPredicted RBP4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 DGUOKQ16854 277 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 ECSCRQ19T08 205 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 HSD17B12Q53GQ0 312 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 NHLRC3Q5JS37 347 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 SYT6Q5T7P8 510 aaPredicted RBP4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 CD200R1LQ6Q8B3 271 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 LYPD2Q6UXB3 125 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 C19orf35Q6ZS72 473 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 CEACAM19Q7Z692 300 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 NFE4Q86UQ8 179 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 LYPD6Q86Y78 171 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 KIR3DL3Q8N743 410 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 STPG4Q8N801 248 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 C19orf18Q8NEA5 215 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 OR51A2Q8NGJ7 313 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 SCARB1Q8WTV0 552 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 TNFAIP8L1Q8WVP5 186 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 PCNPQ8WW12 178 aaKnown RBP4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 FAM218AQ96MZ4 157 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 GAFA1Q96PS6 74 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 DUX5Q96PT3 197 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 CCL13Q99616 98 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 TMED9Q9BVK6 235 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 SLITRK2Q9H156 845 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 METTL9Q9H1A3 318 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 VCX3AQ9NNX9 186 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 MMP26Q9NRE1 261 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 NDUFB11Q9NX14 153 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 TAS2R4Q9NYW5 299 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 CTSZQ9UBR2 303 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 RPUSD1Q9UJJ7 312 aaKnown RBP4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 KPTNQ9Y664 436 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 AUP1Q9Y679 476 aa4.43□□□□□ -1.7
NHLRC3-205ENST00000485407 TRAV8-7A0A075B6U6 113 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 TRAV1-2A0A0B4J238 106 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 TRAV25A0A0B4J276 109 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 IGKV1-12A0A0C4DH73 117 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 PNMA8CA0A1B0GUJ8 204 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 TRDV1A0A1B0GX56 115 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 MSGN1A6NI15 193 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 M0R1W7 72 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 GABRPO00591 440 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 ANGPTL7O43827 346 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 ZNF737O75373 536 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 HAND1O96004 215 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 IGKV1D-12P01611 117 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 RBP4P02753 201 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 MAS1P04201 325 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 GLAP06280 429 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 UBBP0CG47 229 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 GTF2F2P13984 249 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 BCL3P20749 454 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 SRP14P37108 136 aaKnown RBP4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 MAP2K4P45985 399 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 GABRA2P47869 451 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 NPBWR2P48146 333 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 PLP1P60201 277 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 DHODHQ02127 395 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 HNRNPA0Q13151 305 aaKnown RBP4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 TMEM187Q14656 261 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 RSU1Q15404 277 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 TWIST1Q15672 202 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 FAM189A2Q15884 450 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 SSX1Q16384 188 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 MPV17LQ2QL34 196 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 KIAA1644Q3SXP7 199 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 TIMM50Q3ZCQ8 353 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 C1orf100Q5SVJ3 147 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 METTL11BQ5VVY1 283 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 TMEM91Q6ZNR0 172 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 GDPGP1Q6ZNW5 385 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 USP43Q70EL4 1123 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 SSX9Q7RTT3 188 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 C1QL2Q7Z5L3 287 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 TRPT1Q86TN4 253 aaKnown RBP4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 HOGA1Q86XE5 327 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 CD177Q8N6Q3 437 aa4.42□□□□□ -1.7
NHLRC3-205ENST00000485407 FAM216BQ8N7L0 139 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms