RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 HIST1H1DP16402 221 aaKnown RBP8.76□□□□□ -1.01
SCFD1-206ENST00000484733 GALP22466 123 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 MAP2K4P45985 399 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 UBE2KP61086 200 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 PJVKQ0ZLH3 352 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 RTL8BQ17RB0 113 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 IL34Q6ZMJ4 242 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 SGPP2Q8IWX5 399 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 HARBI1Q96MB7 349 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 CITED4Q96RK1 184 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 CCDC90BQ9GZT6 254 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 IFITM5A6NNB3 132 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 SRRM4A7MD48 611 aaKnown RBP8.76□□□□□ -1.01
SCFD1-206ENST00000484733 ARL6IP1Q15041 203 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 SSX1Q16384 188 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 VMA21Q3ZAQ7 101 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 H1FOOQ8IZA3 346 aaPredicted RBP8.76□□□□□ -1.01
SCFD1-206ENST00000484733 OR9G4Q8NGQ1 327 aa8.76□□□□□ -1.01
SCFD1-206ENST00000484733 PEF1Q9UBV8 284 aaKnown RBP8.76□□□□□ -1.01
SCFD1-206ENST00000484733 TRDV1A0A1B0GX56 115 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 H0Y980 276 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 SHOXO15266 292 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 IGHV4-30-4P0DP06 118 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 GNB3P16520 340 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 DUTP33316 252 aaKnown RBP8.75□□□□□ -1.01
SCFD1-206ENST00000484733 DYRK1AQ13627 763 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 DNAH7Q8WXX0 4024 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 SHISA3A0PJX4 238 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 METTL21EPA6NDL7 271 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 DTYMKP23919 212 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 MYL9P24844 172 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 MECP2P51608 486 aaKnown RBP8.75□□□□□ -1.01
SCFD1-206ENST00000484733 PRSS8Q16651 343 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 TATDN3Q17R31 274 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 OSR1Q8TAX0 266 aaPredicted RBP8.75□□□□□ -1.01
SCFD1-206ENST00000484733 VCX3BQ9H321 246 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 NDUFB11Q9NX14 153 aa8.75□□□□□ -1.01
SCFD1-206ENST00000484733 ANKRD34BA5PLL1 514 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 ANKRD65E5RJM6 399 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 OR9G9P0C7N8 305 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 LYL1P12980 280 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 RAB3BP20337 219 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 HSPA13P48723 471 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 OR10A3P58181 314 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 ADAD2Q8NCV1 583 aaKnown RBP8.74□□□□□ -1.01
SCFD1-206ENST00000484733 OR2K2Q8NGT1 345 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 GINS4Q9BRT9 223 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 RSRP1Q9BUV0 290 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 ZNF230Q9UIE0 474 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-206ENST00000484733 MSGN1A6NI15 193 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 MRPS14O60783 128 aaKnown RBP8.74□□□□□ -1.01
SCFD1-206ENST00000484733 CSN3P07498 182 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 TALDO1P37837 337 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 HAPLN4Q86UW8 402 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 THAP7Q9BT49 309 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-206ENST00000484733 COA4Q9NYJ1 87 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 BLOC1S6Q9UL45 172 aa8.74□□□□□ -1.01
SCFD1-206ENST00000484733 RBM7Q9Y580 266 aaKnown RBP8.74□□□□□ -1.01
SCFD1-206ENST00000484733 FAM223BA6NKX1 122 aa8.73□□□□□ -1.01
SCFD1-206ENST00000484733 AIREO43918 545 aa8.73□□□□□ -1.01
SCFD1-206ENST00000484733 OR2A4O95047 310 aa8.73□□□□□ -1.01
SCFD1-206ENST00000484733 CTXN2P0C2S0 81 aa8.73□□□□□ -1.01
SCFD1-206ENST00000484733 FAM223AQ8IWN6 122 aa8.73□□□□□ -1.01
SCFD1-206ENST00000484733 Q8N402 240 aa8.73□□□□□ -1.01
SCFD1-206ENST00000484733 MAFIPQ8WZ33 124 aa8.73□□□□□ -1.01
SCFD1-206ENST00000484733 PHB2Q99623 299 aa8.73□□□□□ -1.01
SCFD1-206ENST00000484733 TRBV9A0A0B4J1U6 114 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 LINC00473A8K010 186 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 CREBL2O60519 120 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-206ENST00000484733 SLC22A5O76082 557 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 SYNJ2BPP57105 145 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 ARFRP1Q13795 201 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 CDK10Q15131 360 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 FAM209BQ5JX69 171 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 LCN12Q6JVE5 192 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 ZNF645Q8N7E2 425 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 SRSF12Q8WXF0 261 aaKnown RBP8.72□□□□□ -1.01
SCFD1-206ENST00000484733 SNAPC3Q92966 411 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 DCSTAMPQ9H295 470 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 IGKV1D-8A0A087WSZ0 117 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 RBMXL2O75526 392 aaKnown RBP8.72□□□□□ -1.01
SCFD1-206ENST00000484733 CRYZL1O95825 349 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 HLA-DQB1P01920 261 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 TNXAQ16473 311 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 RPEL1Q2QD12 228 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 TTC9CQ8N5M4 171 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 EDA2RQ9HAV5 297 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 PEMTQ9UBM1 199 aa8.72□□□□□ -1.01
SCFD1-206ENST00000484733 A0A075B6Q4 140 aa8.71□□□□□ -1.01
SCFD1-206ENST00000484733 TRBV12-3P01733 135 aa8.71□□□□□ -1.01
SCFD1-206ENST00000484733 GABARAPL2P60520 117 aa8.71□□□□□ -1.01
SCFD1-206ENST00000484733 CDNFQ49AH0 187 aa8.71□□□□□ -1.01
SCFD1-206ENST00000484733 SLC25A42Q86VD7 318 aa8.71□□□□□ -1.01
SCFD1-206ENST00000484733 NR2C2APQ86WQ0 139 aa8.71□□□□□ -1.01
SCFD1-206ENST00000484733 MMD2Q8IY49 270 aa8.71□□□□□ -1.01
SCFD1-206ENST00000484733 SPATA25Q9BR10 227 aa8.71□□□□□ -1.01
SCFD1-206ENST00000484733 ATG5Q9H1Y0 275 aa8.71□□□□□ -1.01
SCFD1-206ENST00000484733 OR2W1Q9Y3N9 320 aa8.71□□□□□ -1.01
SCFD1-206ENST00000484733 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.71□□□□□ -1.02
SCFD1-206ENST00000484733 A0A0B4J203 849 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms