RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 SLC2A2P11168 524 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-215ENST00000484203 HIST1H1DP16402 221 aaKnown RBP4.81□□□□□ -1.64
PTCD3-215ENST00000484203 DTYMKP23919 212 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 PPIFP30405 207 aaKnown RBP4.81□□□□□ -1.64
PTCD3-215ENST00000484203 MAP2K4P45985 399 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 OR3A3P47888 321 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 RAB9AP51151 201 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 ZNF616Q08AN1 781 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 ARFRP1Q13795 201 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 RTL8BQ17RB0 113 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 MOGAT2Q3SYC2 334 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 TIMM50Q3ZCQ8 353 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 AKIRIN2Q53H80 203 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 FAM209BQ5JX69 171 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 UBE2UQ5VVX9 321 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 IGFL4Q6B9Z1 124 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 C10orf99Q6UWK7 81 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 FAM131AQ6UXB0 335 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 ZNF429Q86V71 674 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 OR1N2Q8NGR9 330 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 MYOZ3Q8TDC0 251 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 HSPB9Q9BQS6 159 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 GINS4Q9BRT9 223 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 CABLES2Q9BTV7 478 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 C11orf54Q9H0W9 315 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-215ENST00000484203 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTCD3-215ENST00000484203 RDH8Q9NYR8 311 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 LINC00527Q9UJ94 153 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 SSR3Q9UNL2 185 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 RBM7Q9Y580 266 aaKnown RBP4.81□□□□□ -1.64
PTCD3-215ENST00000484203 KIAA2026Q5HYC2 2103 aa4.81□□□□□ -1.64
PTCD3-215ENST00000484203 TRBV6-7A0A0A0MS04 114 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 A0A0A6YYD4 124 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 A0A0A6YYH2 397 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 TMEM272A0A1B0GTI8 110 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 A6NJ64 397 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 LINC01548A6NM66 108 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 RAB27BO00194 218 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 BET1O15155 118 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 ATP6V0E1O15342 81 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 CNIH1O95406 144 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 BRI3O95415 125 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 ATP6V1G2O95670 118 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 FCGR3AP08637 254 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 SCTP09683 121 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 PSMB9P28065 219 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 TMEM50BP56557 158 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 RAB25P57735 213 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 RPS16P62249 146 aaKnown RBP4.8□□□□□ -1.64
PTCD3-215ENST00000484203 CX3CL1P78423 397 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 FHL3Q13643 280 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 ACTBL2Q562R1 376 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 RPL39P5Q59GN2 51 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 DEFB121Q5J5C9 76 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 PLAC9Q5JTB6 97 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 HES5Q5TA89 166 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 HACD4Q5VWC8 232 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 HIST2H2BDQ6DRA6 164 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 FAM53AQ6NSI3 398 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-215ENST00000484203 CROCCP3Q8IVE0 287 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 ZNF491Q8N8L2 437 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 ABHD5Q8WTS1 349 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 GFI1Q99684 422 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 AIFM2Q9BRQ8 373 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 VCX3AQ9NNX9 186 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 METTL1Q9UBP6 276 aaKnown RBP4.8□□□□□ -1.64
PTCD3-215ENST00000484203 STUB1Q9UNE7 303 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 PRELID3BQ9Y3B1 194 aa4.8□□□□□ -1.64
PTCD3-215ENST00000484203 SEC14L6B5MCN3 397 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 I3L521 148 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 M0R1X1 148 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 MFNGO00587 321 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 ACTL6BO94805 426 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 PRB2P02812 416 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-215ENST00000484203 OR8U9P0C7N5 309 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 CD36P16671 472 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 ZP3P21754 424 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 AADACP22760 399 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 LUMP51884 338 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-215ENST00000484203 CLDN12P56749 244 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 ARPC4P59998 168 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 FXYD3Q14802 87 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 PSG5Q15238 335 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 TATDN3Q17R31 274 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 VMA21Q3ZAQ7 101 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 CDNFQ49AH0 187 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 C22orf42Q6IC83 251 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 ZNF773Q6PK81 442 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 UNQ5815/PRO19632Q6UWF5 114 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 PPP1R27Q86WC6 154 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 SPARTQ8N0X7 666 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 TEX45Q8NA69 505 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 OR11H1Q8NG94 326 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 VSTM2AQ8TAG5 236 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 OSR1Q8TAX0 266 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-215ENST00000484203 ARPC1AQ92747 370 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 BORCS5Q969J3 196 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 ABHD14BQ96IU4 210 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 USMG5Q96IX5 58 aa4.79□□□□□ -1.64
PTCD3-215ENST00000484203 NEU1Q99519 415 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms