RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 NUP210LQ5VU65 1888 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 IGF2RP11717 2491 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 TRAV38-1A0A0B4J264 116 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 MDFIC2A0A1B0GVS7 189 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 NKX6-3A6NJ46 265 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 ZNF729A6NN14 1252 aaPredicted RBP7.7□□□□□ -1.18
CALD1-220ENST00000482470 SPINK4O60575 86 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 CRYABP02511 175 aaKnown RBP7.7□□□□□ -1.18
CALD1-220ENST00000482470 KIR2DL2P43627 348 aaPredicted RBP7.7□□□□□ -1.18
CALD1-220ENST00000482470 IL15RAQ13261 267 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 ARL6IP6Q8N6S5 226 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 MISP3Q96FF7 219 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 RCC1LQ96I51 464 aaKnown RBP7.7□□□□□ -1.18
CALD1-220ENST00000482470 COMMD5Q9GZQ3 224 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 VAX2Q9UIW0 290 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 ZDHHC8Q9ULC8 765 aa7.7□□□□□ -1.18
CALD1-220ENST00000482470 ATRXP46100 2492 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 A0A087X0M5 115 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 IGHV2OR16-5A0A0B4J2B6 119 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 A0A1B0GX30 115 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 AHRRA9YTQ3 701 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 K7N7A8 449 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 AP4M1O00189 453 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 TRGC2P03986 189 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 MGST1P10620 155 aaKnown RBP7.69□□□□□ -1.18
CALD1-220ENST00000482470 LYL1P12980 280 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 KHDC3LQ587J8 217 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 NMSQ5H8A3 153 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 PCSK4Q6UW60 755 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 ZNF497Q6ZNH5 498 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 MRPL41Q8IXM3 137 aaKnown RBP7.69□□□□□ -1.18
CALD1-220ENST00000482470 EGLN1Q9GZT9 426 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 P2RY6Q15077 328 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 BSXQ3C1V8 233 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 TMEM41BQ5BJD5 291 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 C14orf144Q96I85 54 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 SNX22Q96L94 193 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 HSD17B10Q99714 261 aaKnown RBP7.69□□□□□ -1.18
CALD1-220ENST00000482470 GGACTQ9BVM4 153 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 TOLLIPQ9H0E2 274 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 OR6C3Q9NZP0 311 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.69□□□□□ -1.187e-6■■■□□ 17.4
CALD1-220ENST00000482470 CREBBPQ92793 2442 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 ZNF320A2RRD8 509 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 ZNF705FA8MVS1 300 aaPredicted RBP7.69□□□□□ -1.18
CALD1-220ENST00000482470 DVL1O14640 695 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 SLC31A2O15432 143 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 IGKV1-5P01602 117 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 ZNF705DP0CH99 300 aaPredicted RBP7.69□□□□□ -1.18
CALD1-220ENST00000482470 ZNF705BP0CI00 300 aaPredicted RBP7.69□□□□□ -1.18
CALD1-220ENST00000482470 GNB1P62873 340 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 RPL30P62888 115 aaKnown RBP7.69□□□□□ -1.18
CALD1-220ENST00000482470 HABP2Q14520 560 aaPredicted RBP7.69□□□□□ -1.18
CALD1-220ENST00000482470 RNF212Q495C1 297 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 KCNIP4Q6PIL6 250 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 TMEM108Q6UXF1 575 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 WDR82Q6UXN9 313 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 ZNF66Q6ZN08 573 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 MRGPRGQ86SM5 289 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 IL22RA2Q969J5 263 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 GAR1Q9NY12 217 aaKnown RBP7.69□□□□□ -1.18
CALD1-220ENST00000482470 DOK5Q9P104 306 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 RNF7Q9UBF6 113 aa7.69□□□□□ -1.18
CALD1-220ENST00000482470 YLPM1P49750 1951 aaKnown RBP7.68□□□□□ -1.18
CALD1-220ENST00000482470 C11orf94C9JXX5 98 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 MGST3O14880 152 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 APOA2P02652 100 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 ACSF3Q4G176 576 aaPredicted RBP7.68□□□□□ -1.18
CALD1-220ENST00000482470 PEAR1Q5VY43 1037 aaPredicted RBP7.68□□□□□ -1.18
CALD1-220ENST00000482470 STUMQ69YW2 141 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 WDR86Q86TI4 376 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 RAB24Q969Q5 203 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 QTRT1Q9BXR0 403 aaKnown RBP7.68□□□□□ -1.18
CALD1-220ENST00000482470 PLA2G2EQ9NZK7 142 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 IQCF6A8MYZ5 107 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 ADH4P08319 380 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 SRP19P09132 144 aaKnown RBP7.68□□□□□ -1.18
CALD1-220ENST00000482470 CD82P27701 267 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 RTL8BQ17RB0 113 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 Q6P435 159 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 LSM10Q969L4 123 aaKnown RBP7.68□□□□□ -1.18
CALD1-220ENST00000482470 MLNRO43193 412 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 IGHV3-48P01763 117 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 OR5G3P0C626 314 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 CD1BP29016 333 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 EIF2S3P41091 472 aaKnown RBP7.68□□□□□ -1.18
CALD1-220ENST00000482470 HTD2P86397 168 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 TFF3Q07654 80 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 SLC35E3Q7Z769 313 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 UHRF2Q96PU4 802 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 WDR61Q9GZS3 305 aaKnown RBP7.68□□□□□ -1.18
CALD1-220ENST00000482470 TUBG2Q9NRH3 451 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 SLC35D1Q9NTN3 355 aa7.68□□□□□ -1.18
CALD1-220ENST00000482470 PHOX2AO14813 284 aa7.67□□□□□ -1.18
CALD1-220ENST00000482470 GALR2O43603 387 aaPredicted RBP7.67□□□□□ -1.18
CALD1-220ENST00000482470 ZNF25P17030 456 aaPredicted RBP7.67□□□□□ -1.18
CALD1-220ENST00000482470 GALR1P47211 349 aa7.67□□□□□ -1.18
CALD1-220ENST00000482470 BPIFB3P59826 476 aa7.67□□□□□ -1.18
CALD1-220ENST00000482470 SERF2P84101 59 aa7.67□□□□□ -1.18
CALD1-220ENST00000482470 ARL16Q0P5N6 197 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms