RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 CNPY1Q3B7I2 92 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 ZNF684Q5T5D7 378 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 TRIQKQ629K1 86 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 DPPA2Q7Z7J5 298 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 OR1S1Q8NH92 325 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 GHSRQ92847 366 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 AURKBQ96GD4 344 aaPredicted RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 C19orf24Q9BVV8 132 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 TCEAL2Q9H3H9 227 aaPredicted RBP2.39□□□□□ -2.03
SMC6-208ENST00000481708 TUBB1Q9H4B7 451 aa2.39□□□□□ -2.03
SMC6-208ENST00000481708 COL12A1Q99715 3063 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 HEATR5AQ86XA9 2040 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 IGLV3-32A0A0A0MS00 114 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 IGHV6-1A0A0B4J1U7 121 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 NDUFS5O43920 106 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 REM1O75628 298 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 KCNK2O95069 426 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 DUSP14O95147 198 aaKnown RBP2.38□□□□□ -2.03
SMC6-208ENST00000481708 CGAP01215 116 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 C1QBP02746 253 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 SLC35G6P0C7Q6 338 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 COX6A1P12074 109 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 CTBP2P56545 445 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 AP1S1P61966 158 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 GSG1LQ6UXU4 331 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 ZNF614Q8N883 585 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 C16orf78Q8WTQ4 265 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 FAM104AQ969W3 186 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 TRIM15Q9C019 465 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 LRTM1Q9HBL6 345 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 PROK2Q9HC23 129 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 LHX9Q9NQ69 397 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 SLC7A10Q9NS82 523 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 TP53TG5Q9Y2B4 290 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 INSIG2Q9Y5U4 225 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 IGHV1-45A0A0A0MS14 117 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 SSNA1O43805 119 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 MT-ND4P03905 459 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 CD36P16671 472 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 PMVKQ15126 192 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 CDNFQ49AH0 187 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 ACSBG2Q5FVE4 666 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 FAM131AQ6UXB0 335 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 Q6ZRU5 148 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 DRAM1Q8N682 238 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 TMEM75Q8N9X5 138 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 OR52P1PQ8NH57 321 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 ZNF184Q99676 751 aaPredicted RBP2.38□□□□□ -2.03
SMC6-208ENST00000481708 SEC22CQ9BRL7 303 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 C1orf50Q9BV19 199 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 ZNF580Q9UK33 172 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 YTHDF2Q9Y5A9 579 aaKnown RBP2.38□□□□□ -2.03
SMC6-208ENST00000481708 CCDC88CQ9P219 2028 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 APOBP04114 4563 aaKnown RBP2.38□□□□□ -2.03
SMC6-208ENST00000481708 IGHV1-69DA0A0B4J2H0 117 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 OR11H12B2RN74 326 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 UPK1AO00322 258 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 STK16O75716 305 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 APOEP02649 317 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 FGF6P10767 208 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 MAGEA12P43365 314 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 TTPAP49638 278 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 RAB5BP61020 215 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 HBG1P69891 147 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 HBG2P69892 147 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 HPCAP84074 193 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 TMEM97Q5BJF2 176 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 C1orf194Q5T5A4 169 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 IL34Q6ZMJ4 242 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 C6orf120Q7Z4R8 191 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 NATD1Q8N6N6 113 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 OR11H1Q8NG94 326 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 OR11H2Q8NH07 326 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 MRGPRDQ8TDS7 321 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 HAUS1Q96CS2 278 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 GALNT14Q96FL9 552 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 IMP4Q96G21 291 aaKnown RBP2.38□□□□□ -2.03
SMC6-208ENST00000481708 HIST1H4GQ99525 98 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 SH3GL3Q99963 347 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 SPNS1Q9H2V7 528 aa2.38□□□□□ -2.03
SMC6-208ENST00000481708 JMJD1CQ15652 2540 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 TLN1Q9Y490 2541 aaKnown RBP2.37□□□□□ -2.03
SMC6-208ENST00000481708 MUC17Q685J3 4493 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 PLAC8L1A1L4L8 177 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 CD5LO43866 347 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 CCDC22O60826 627 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 IFNA21P01568 189 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 IGLV2-23P01705 113 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 ALPLP05186 524 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 MMP7P09237 267 aaPredicted RBP2.37□□□□□ -2.03
SMC6-208ENST00000481708 CRISP3P54108 245 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 GFERP55789 205 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 MEF2CQ06413 473 aaPredicted RBP2.37□□□□□ -2.03
SMC6-208ENST00000481708 CDK10Q15131 360 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 Q499Y3 187 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 LAMTOR1Q6IAA8 161 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 CLEC19AQ6UXS0 136 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 OR52L1Q8NGH7 329 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 AIG1Q9NVV5 245 aa2.37□□□□□ -2.03
SMC6-208ENST00000481708 FBXL12Q9NXK8 326 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms