RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 NKX1-2Q9UD57 310 aaPredicted RBP11.12□□□□□ -0.63
SMARCE1-209ENST00000478349 A0A075B6Q4 140 aa11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 MFNGO00587 321 aa11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 PROP1O75360 226 aa11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 SLC22A5O76082 557 aa11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 CTXN2P0C2S0 81 aa11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 CD36P16671 472 aa11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 IGSF11Q5DX21 431 aa11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 Q6ZS49 121 aa11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 TEX45Q8NA69 505 aa11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 OSR1Q8TAX0 266 aaPredicted RBP11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 TINAGL1Q9GZM7 467 aaPredicted RBP11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 MRPS7Q9Y2R9 242 aaKnown RBP11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 PRELID3BQ9Y3B1 194 aa11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 STAB2Q8WWQ8 2551 aa11.11□□□□□ -0.63
SMARCE1-209ENST00000478349 MRPS14O60783 128 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 IGLV1-51P01701 117 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 GSTT2P0CG29 244 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 GSTT2BP0CG30 244 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 GNB3P16520 340 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 DTYMKP23919 212 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 MAP2K4P45985 399 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 UBE2KP61086 200 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 RPEL1Q2QD12 228 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 LCN12Q6JVE5 192 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 IZUMO2Q6UXV1 221 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 GTSCR1Q86UQ5 136 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 SBSPONQ8IVN8 264 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 BVESQ8NE79 360 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 OR5T1Q8NG75 326 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 OR9G4Q8NGQ1 327 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 NRG4Q8WWG1 115 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 PEMTQ9UBM1 199 aa11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 PEF1Q9UBV8 284 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-209ENST00000478349 TRDV1A0A1B0GX56 115 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 ANKRD34BA5PLL1 514 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 FAM223BA6NKX1 122 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 ANKRD65E5RJM6 399 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 RAB27BO00194 218 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 TUSC2O75896 110 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 OR2A4O95047 310 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 IGLV2-23P01705 113 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 TNXAQ16473 311 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 OVCH2Q7RTZ1 564 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 SLC25A42Q86VD7 318 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 FAM223AQ8IWN6 122 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 SNAPC3Q92966 411 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 CNBD2Q96M20 576 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 SPIN2AQ99865 258 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 SPIN2BQ9BPZ2 258 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 ATG5Q9H1Y0 275 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 KCNK7Q9Y2U2 307 aa11.09□□□□□ -0.63
SMARCE1-209ENST00000478349 TRIM64CA6NLI5 447 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 A8MZ25 164 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 AIREO43918 545 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 CRYZL1O95825 349 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 CRYGBP07316 175 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 OR9G9P0C7N8 305 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 LYL1P12980 280 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 OR10A3P58181 314 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 GABARAPL2P60520 117 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 PJVKQ0ZLH3 352 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 KLF5Q13887 457 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 PRSS8Q16651 343 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 ZNF343Q6P1L6 599 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 H1FOOQ8IZA3 346 aaPredicted RBP11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 Q8N402 240 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 VSTM2AQ8TAG5 236 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 SRSF12Q8WXF0 261 aaKnown RBP11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 ACOT12Q8WYK0 555 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 FCGR1BQ92637 280 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 DCUN1D5Q9BTE7 237 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 DCSTAMPQ9H295 470 aa11.08□□□□□ -0.64
SMARCE1-209ENST00000478349 MSGN1A6NI15 193 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 IGHV4-30-4P0DP06 118 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 DUTP33316 252 aaKnown RBP11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 SYNJ2BPP57105 145 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 LINC00205P59089 165 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 CDK10Q15131 360 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 KCTD9Q7L273 389 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 MMD2Q8IY49 270 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 ZNF645Q8N7E2 425 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 OR2K2Q8NGT1 345 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 MAFIPQ8WZ33 124 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 ISOC1Q96CN7 298 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 Q9H521 79 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 SIGLEC8Q9NYZ4 499 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 ZNF230Q9UIE0 474 aaPredicted RBP11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 RAB26Q9ULW5 256 aa11.07□□□□□ -0.64
SMARCE1-209ENST00000478349 NOTOA8MTQ0 251 aa11.06□□□□□ -0.64
SMARCE1-209ENST00000478349 GNG2P59768 71 aa11.06□□□□□ -0.64
SMARCE1-209ENST00000478349 HACD4Q5VWC8 232 aa11.06□□□□□ -0.64
SMARCE1-209ENST00000478349 C22orf42Q6IC83 251 aa11.06□□□□□ -0.64
SMARCE1-209ENST00000478349 TPRA1Q86W33 373 aa11.06□□□□□ -0.64
SMARCE1-209ENST00000478349 ADAD2Q8NCV1 583 aaKnown RBP11.06□□□□□ -0.64
SMARCE1-209ENST00000478349 OR4S2Q8NH73 311 aa11.06□□□□□ -0.64
SMARCE1-209ENST00000478349 DDB2Q92466 427 aa11.06□□□□□ -0.64
SMARCE1-209ENST00000478349 CITED4Q96RK1 184 aa11.06□□□□□ -0.64
SMARCE1-209ENST00000478349 SPATA25Q9BR10 227 aa11.06□□□□□ -0.64
SMARCE1-209ENST00000478349 TUBA4BQ9H853 241 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms