RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 RTL8BQ17RB0 113 aa15.89■□□□□ 0.13
ACTB-210ENST00000477812 TMEM177Q53S58 311 aa15.89■□□□□ 0.13
ACTB-210ENST00000477812 DHRS7BQ6IAN0 325 aaPredicted RBP15.89■□□□□ 0.13
ACTB-210ENST00000477812 TBC1D26Q86UD7 250 aa15.89■□□□□ 0.13
ACTB-210ENST00000477812 OR8H1Q8NGG4 311 aa15.89■□□□□ 0.13
ACTB-210ENST00000477812 RNF5Q99942 180 aa15.89■□□□□ 0.13
ACTB-210ENST00000477812 SLC25A21Q9BQT8 299 aaPredicted RBP15.89■□□□□ 0.13
ACTB-210ENST00000477812 RAB18Q9NP72 206 aa15.89■□□□□ 0.13
ACTB-210ENST00000477812 MOB4Q9Y3A3 225 aa15.89■□□□□ 0.13
ACTB-210ENST00000477812 PRELID3BQ9Y3B1 194 aa15.89■□□□□ 0.13
ACTB-210ENST00000477812 MPPED1O15442 326 aa15.88■□□□□ 0.13
ACTB-210ENST00000477812 RAMP3O60896 148 aa15.88■□□□□ 0.13
ACTB-210ENST00000477812 VSIG10L2P0DP72 767 aa15.88■□□□□ 0.13
ACTB-210ENST00000477812 F2RP25116 425 aa15.88■□□□□ 0.13
ACTB-210ENST00000477812 CNTFRP26992 372 aa15.88■□□□□ 0.13
ACTB-210ENST00000477812 SLC6A1P30531 599 aa15.88■□□□□ 0.13
ACTB-210ENST00000477812 RBMS2Q15434 407 aaKnown RBP15.88■□□□□ 0.13
ACTB-210ENST00000477812 C5orf56Q8N8D9 126 aa15.88■□□□□ 0.13
ACTB-210ENST00000477812 NPBQ8NG41 125 aa15.88■□□□□ 0.13
ACTB-210ENST00000477812 OR4C13Q8NGP0 309 aa15.88■□□□□ 0.13
ACTB-210ENST00000477812 TMEM230Q96A57 120 aa15.88■□□□□ 0.13
ACTB-210ENST00000477812 RNF212BA8MTL3 300 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 NDUFA3O95167 84 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 CRYZL1O95825 349 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 IGLV2-23P01705 113 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 KIR2DS2P43631 304 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 RELBQ01201 579 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 ABCA11PQ4W5N1 156 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 C11orf88Q6PI97 169 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 SPAG16Q8N0X2 631 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 FAM71E2Q8N5Q1 922 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 Q8N9W7 124 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 ADAD2Q8NCV1 583 aaKnown RBP15.87■□□□□ 0.13
ACTB-210ENST00000477812 OR4S2Q8NH73 311 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 FLYWCH2Q96CP2 140 aaKnown RBP15.87■□□□□ 0.13
ACTB-210ENST00000477812 SCGB3A2Q96PL1 93 aa15.87■□□□□ 0.13
ACTB-210ENST00000477812 LIN7CQ9NUP9 197 aaKnown RBP15.87■□□□□ 0.13
ACTB-210ENST00000477812 C14orf166Q9Y224 244 aaKnown RBP15.87■□□□□ 0.13
ACTB-210ENST00000477812 SRRM4A7MD48 611 aaKnown RBP15.86■□□□□ 0.13
ACTB-210ENST00000477812 FGF16O43320 207 aa15.86■□□□□ 0.13
ACTB-210ENST00000477812 S100GP29377 79 aa15.86■□□□□ 0.13
ACTB-210ENST00000477812 MMDQ15546 238 aa15.86■□□□□ 0.13
ACTB-210ENST00000477812 ZNF585BQ52M93 769 aa15.86■□□□□ 0.13
ACTB-210ENST00000477812 OSR1Q8TAX0 266 aaPredicted RBP15.86■□□□□ 0.13
ACTB-210ENST00000477812 TAF15Q92804 592 aaKnown RBP eCLIP15.86■□□□□ 0.13
ACTB-210ENST00000477812 FAM212BQ9NTI7 297 aaPredicted RBP15.86■□□□□ 0.13
ACTB-210ENST00000477812 C1RLQ9NZP8 487 aa15.86■□□□□ 0.13
ACTB-210ENST00000477812 COPZ2Q9P299 210 aa15.86■□□□□ 0.13
ACTB-210ENST00000477812 CRYM-AS1A6NIL9 109 aa15.85■□□□□ 0.13
ACTB-210ENST00000477812 M0QZK8 103 aa15.85■□□□□ 0.13
ACTB-210ENST00000477812 NBR2O15453 112 aa15.85■□□□□ 0.13
ACTB-210ENST00000477812 SPDEFO95238 335 aa15.85■□□□□ 0.13
ACTB-210ENST00000477812 PSG5Q15238 335 aa15.85■□□□□ 0.13
ACTB-210ENST00000477812 TCTEX1D1Q8N7M0 179 aa15.85■□□□□ 0.13
ACTB-210ENST00000477812 CCDC71LQ8N9Z2 235 aa15.85■□□□□ 0.13
ACTB-210ENST00000477812 CD300LFQ8TDQ1 290 aa15.85■□□□□ 0.13
ACTB-210ENST00000477812 HARBI1Q96MB7 349 aa15.85■□□□□ 0.13
ACTB-210ENST00000477812 TP53RKQ96S44 253 aa15.85■□□□□ 0.13
ACTB-210ENST00000477812 FBN1P35555 2871 aaKnown RBP15.84■□□□□ 0.13
ACTB-210ENST00000477812 H0Y980 276 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 PEX14O75381 377 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 CRYGBP07316 175 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 LGALS7P47929 136 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 RIPPLY3P57055 190 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 RPS16P62249 146 aaKnown RBP15.84■□□□□ 0.13
ACTB-210ENST00000477812 BLCAPP62952 87 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 CBX3Q13185 183 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 KRTAP24-1Q3LI83 254 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 Q6ZS46 218 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 Q8N2B8 174 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.84■□□□□ 0.13
ACTB-210ENST00000477812 POC5Q8NA72 575 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 TSNAXQ99598 290 aaKnown RBP15.84■□□□□ 0.13
ACTB-210ENST00000477812 NPFFR1Q9GZQ6 430 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 RANBP3Q9H6Z4 567 aaPredicted RBP15.84■□□□□ 0.13
ACTB-210ENST00000477812 NAA60Q9H7X0 242 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 ZNF702PQ9H963 129 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 PLEKHA2Q9HB19 425 aa15.84■□□□□ 0.13
ACTB-210ENST00000477812 C3orf85A0A1B0GTC6 90 aa15.83■□□□□ 0.12
ACTB-210ENST00000477812 NCBP2LA6PVI3 153 aaKnown RBP15.83■□□□□ 0.12
ACTB-210ENST00000477812 RRHO14718 337 aa15.83■□□□□ 0.12
ACTB-210ENST00000477812 SHOXO15266 292 aa15.83■□□□□ 0.12
ACTB-210ENST00000477812 S1PR2O95136 353 aa15.83■□□□□ 0.12
ACTB-210ENST00000477812 NDUFA7O95182 113 aa15.83■□□□□ 0.12
ACTB-210ENST00000477812 SUPT4H1P63272 117 aaKnown RBP15.83■□□□□ 0.12
ACTB-210ENST00000477812 C5orf64Q2M2E5 130 aa15.83■□□□□ 0.12
ACTB-210ENST00000477812 MZT2BQ6NZ67 158 aa15.83■□□□□ 0.12
ACTB-210ENST00000477812 Q6ZSV7 163 aa15.83■□□□□ 0.12
ACTB-210ENST00000477812 PALMDQ9NP74 551 aa15.83■□□□□ 0.12
ACTB-210ENST00000477812 COMMD9Q9P000 198 aa15.83■□□□□ 0.12
ACTB-210ENST00000477812 FLVCR2Q9UPI3 526 aa15.83■□□□□ 0.12
ACTB-210ENST00000477812 SH2D7A6NKC9 451 aaPredicted RBP15.82■□□□□ 0.12
ACTB-210ENST00000477812 SLC25A17O43808 307 aa15.82■□□□□ 0.12
ACTB-210ENST00000477812 TSPAN9O75954 239 aa15.82■□□□□ 0.12
ACTB-210ENST00000477812 HPRT1P00492 218 aa15.82■□□□□ 0.12
ACTB-210ENST00000477812 IGKV1-39P01597 117 aa15.82■□□□□ 0.12
ACTB-210ENST00000477812 IGKV1D-39P04432 117 aa15.82■□□□□ 0.12
ACTB-210ENST00000477812 TCRBP04435 133 aa15.82■□□□□ 0.12
ACTB-210ENST00000477812 UBE2KP61086 200 aa15.82■□□□□ 0.12
ACTB-210ENST00000477812 POU2AF1Q16633 256 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms