RNA–Protein interactions for RNA: ENST00000476635.5

PRKCI-202, Transcript of protein kinase C iota, humanhuman

TSL 1 (best)

Gene PRKCI, Length 3,650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCI-202ENST00000476635 IL1F10Q8WWZ1 152 aa5.23□□□□□ -1.57
PRKCI-202ENST00000476635 S1PR3Q99500 378 aa5.23□□□□□ -1.57
PRKCI-202ENST00000476635 PDCD10Q9BUL8 212 aa5.23□□□□□ -1.57
PRKCI-202ENST00000476635 CLEC7AQ9BXN2 247 aa5.23□□□□□ -1.57
PRKCI-202ENST00000476635 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.23□□□□□ -1.57
PRKCI-202ENST00000476635 PRR13Q9NZ81 148 aa5.23□□□□□ -1.57
PRKCI-202ENST00000476635 BOD1L1Q8NFC6 3051 aa5.23□□□□□ -1.57
PRKCI-202ENST00000476635 PKD1L2Q7Z442 2459 aa5.23□□□□□ -1.57
PRKCI-202ENST00000476635 hCG_1809904A0A1W2PP81 198 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 A0A1W2PPE2 198 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 A0A1W2PR64 198 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 A0A1W2PRV1 198 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 MSGN1A6NI15 193 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 MARCH11A6NNE9 402 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 TSPAN9O75954 239 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 JTBO76095 146 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 TMEM50AO95807 157 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 FSHBP01225 129 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 HOXB5P09067 269 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 SEC11BP0C7V7 166 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 GATA3P23771 443 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 CD1BP29016 333 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 RPL12P30050 165 aaKnown RBP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 SSTR2P30874 369 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 RAB13P51153 203 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 PRRX1P54821 245 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 EDDM3BP56851 147 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 EXOSC2Q13868 293 aaKnown RBP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 TMEM249Q2WGJ8 235 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 FAM53AQ6NSI3 398 aaPredicted RBP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 SPAG16Q8N0X2 631 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 TEX45Q8NA69 505 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 SAT2Q96F10 170 aaPredicted RBP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 CHIAQ9BZP6 476 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 UBQLN2Q9UHD9 624 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 A0A1W2PPI3 338 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 UPK2O00526 184 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 SPP1P10451 314 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 HOXB4P17483 251 aaPredicted RBP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 GPR6P46095 362 aaPredicted RBP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 LGALS7P47929 136 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 CRIP2P52943 208 aaPredicted RBP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 SNTB1Q13884 538 aaKnown RBP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 OR2C3Q8N628 320 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 INO80EQ8NBZ0 244 aaPredicted RBP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 OR13D1Q8NGV5 346 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 R3HDM4Q96D70 268 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 PSMG3Q9BT73 122 aaPredicted RBP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 FKBP11Q9NYL4 201 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 GNG12Q9UBI6 72 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 INSIG2Q9Y5U4 225 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 IGSF10Q6WRI0 2623 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 YLPM1P49750 1951 aaKnown RBP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 IGHV3-64DA0A0J9YX35 117 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 ARPC5O15511 151 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 FOXH1O75593 365 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 HRASP01112 189 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 SULT1A1P50225 295 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 BPIFB3P59826 476 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 EWSR1Q01844 656 aaKnown RBP eCLIP5.22□□□□□ -1.57
PRKCI-202ENST00000476635 DCUN1D4Q92564 292 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 COL6A6A6NMZ7 2263 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 PIEZO2Q9H5I5 2752 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 IGF2RP11717 2491 aa5.22□□□□□ -1.57
PRKCI-202ENST00000476635 LOC105371242A0A075B767 164 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 KANTRA0A1W2PQU2 76 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 IGSF23A1L1A6 192 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 SYNGR2O43760 224 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 CCL3L1P16619 93 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 PVALBP20472 110 aaPredicted RBP5.21□□□□□ -1.57
PRKCI-202ENST00000476635 RAB5CP51148 216 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 SSX2Q16385 188 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 RPL39P5Q59GN2 51 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 C9orf139Q6ZV77 190 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 KRTAP1-3Q8IUG1 177 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 OR5B3Q8NH48 314 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 PSMG3-AS1Q96PY0 264 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 CCL19Q99731 98 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 REG4Q9BYZ8 158 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 PRNDQ9UKY0 176 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 WASHC3Q9Y3C0 194 aa5.21□□□□□ -1.57
PRKCI-202ENST00000476635 TLN1Q9Y490 2541 aaKnown RBP5.21□□□□□ -1.57
PRKCI-202ENST00000476635 KBTBD11O94819 623 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 CFDP00746 253 aaPredicted RBP5.21□□□□□ -1.58
PRKCI-202ENST00000476635 OR9G9P0C7N8 305 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 TPT1P13693 172 aaKnown RBP5.21□□□□□ -1.58
PRKCI-202ENST00000476635 NDUFB7P17568 137 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 SULT1A2P50226 295 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 UBE2E1P51965 193 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 PRCDQ00LT1 54 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 LOXL1Q08397 574 aaPredicted RBP5.21□□□□□ -1.58
PRKCI-202ENST00000476635 RTL8BQ17RB0 113 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 TPTE2P1Q5T6R2 138 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 ABHD12Q8N2K0 398 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 TMEM252Q8N6L7 170 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 BOLLQ8N9W6 283 aaKnown RBP5.21□□□□□ -1.58
PRKCI-202ENST00000476635 CLDND2Q8NHS1 167 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 TCTEX1D2Q8WW35 142 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 PIMREGQ9BSJ6 248 aa5.21□□□□□ -1.58
PRKCI-202ENST00000476635 PRDM13Q9H4Q3 707 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms