RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 RNF114Q9Y508 228 aa12.6□□□□□ -0.39
CPSF3-203ENST00000475482 ODF3BA8MYP8 253 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 PGLYRP1O75594 196 aaPredicted RBP12.59□□□□□ -0.39
CPSF3-203ENST00000475482 HLA-GP17693 338 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 CD83Q01151 205 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 PRAMEF5Q5TYX0 476 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 LGI3Q8N145 548 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 TCTEX1D1Q8N7M0 179 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 C8orf31Q8N9H6 132 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 OR11H6Q8NGC7 330 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 PIFOQ8TCI5 191 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 HSD17B10Q99714 261 aaKnown RBP12.59□□□□□ -0.39
CPSF3-203ENST00000475482 SSX3Q99909 188 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 RAB18Q9NP72 206 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 LIN7CQ9NUP9 197 aaKnown RBP12.59□□□□□ -0.39
CPSF3-203ENST00000475482 PIPOXQ9P0Z9 390 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 PSG11Q9UQ72 335 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 GAB2Q9UQC2 676 aa12.59□□□□□ -0.39
CPSF3-203ENST00000475482 H0Y980 276 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 GOSR2O14653 212 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 RAB29O14966 203 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 IFNA21P01568 189 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 OR5AC1P0C628 307 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 IGHV1-8P0DP01 117 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 F2RP25116 425 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 LRRC75BQ2VPJ9 315 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 LDLRAD2Q5SZI1 272 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 DHRS7BQ6IAN0 325 aaPredicted RBP12.58□□□□□ -0.4
CPSF3-203ENST00000475482 ZNF66Q6ZN08 573 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 TCTE3Q8IZS6 198 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 DRAM1Q8N682 238 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 OR11H7Q8NGC8 314 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 ZNF436Q9C0F3 470 aaPredicted RBP12.58□□□□□ -0.4
CPSF3-203ENST00000475482 SESN1Q9Y6P5 492 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 CMYA5Q8N3K9 4069 aa12.58□□□□□ -0.4
CPSF3-203ENST00000475482 MEGF8Q7Z7M0 2845 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 A0A087X0M5 115 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 A0A1B0GX30 115 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 H3BUX3 64 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 ST8SIA5O15466 376 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 SERPINE2P07093 398 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 GIPP09681 153 aaPredicted RBP12.57□□□□□ -0.4
CPSF3-203ENST00000475482 RAP2BP61225 183 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 CYCSP99999 105 aaKnown RBP12.57□□□□□ -0.4
CPSF3-203ENST00000475482 TREML4Q6UXN2 200 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 LIAT1Q6ZQX7 453 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 SLC25A48Q6ZT89 311 aaKnown RBP12.57□□□□□ -0.4
CPSF3-203ENST00000475482 LRTM2Q8N967 370 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 ST6GAL2Q96JF0 529 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 AGMATQ9BSE5 352 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 PARP12Q9H0J9 701 aaKnown RBP12.57□□□□□ -0.4
CPSF3-203ENST00000475482 TMEM222Q9H0R3 208 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 FAM212BQ9NTI7 297 aaPredicted RBP12.57□□□□□ -0.4
CPSF3-203ENST00000475482 RNF150Q9ULK6 438 aa12.57□□□□□ -0.4
CPSF3-203ENST00000475482 TBL2Q9Y4P3 447 aaKnown RBP12.57□□□□□ -0.4
CPSF3-203ENST00000475482 DUXBA0A1W2PPF3 345 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 DBX1A6NMT0 343 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 TOR1AO14656 332 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 ATG12O94817 140 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 RPA2P15927 270 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 COX7A1P24310 79 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 PAX6P26367 422 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 IL3RAP26951 378 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 PRRX1P54821 245 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 TMEM187Q14656 261 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 ANKRD55Q3KP44 614 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 GSG1LQ6UXU4 331 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 LHFPL4Q7Z7J7 247 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 ZNF695Q8IW36 515 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 DYNAPQ8N1N2 210 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 OR5M8Q8NGP6 311 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 OR13D1Q8NGV5 346 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 CD300LFQ8TDQ1 290 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 IL22RA2Q969J5 263 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 ADTRPQ96IZ2 230 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 S1PR3Q99500 378 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 PDCD10Q9BUL8 212 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 TMEM133Q9H2Q1 129 aa12.56□□□□□ -0.4
CPSF3-203ENST00000475482 RANGRFQ9HD47 186 aaPredicted RBP12.56□□□□□ -0.4
CPSF3-203ENST00000475482 TNFSF12O43508 249 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 MMP23AO75900 390 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 OR2A4O95047 310 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 IGLV2-14P01704 120 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 CXCL3P19876 107 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 UCP1P25874 307 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 LGALS4P56470 323 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 CT45A1Q5HYN5 189 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 LINC00311Q8N616 119 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 ZNF439Q8NDP4 499 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 OR51H1Q8NH63 302 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 OR9G1Q8NH87 305 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 CT45A3Q8NHU0 189 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 GLYATL2Q8WU03 294 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 MALSU1Q96EH3 234 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 ABHD14BQ96IU4 210 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 OR2A7Q96R45 310 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 TP53RKQ96S44 253 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 IFI27L2Q9H2X8 130 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 SDHAF2Q9NX18 166 aa12.55□□□□□ -0.4
CPSF3-203ENST00000475482 PRELID3BQ9Y3B1 194 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms