RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 UBE2UQ5VVX9 321 aa15.68■□□□□ 0.1
PDLIM4-206ENST00000474421 BVESQ8NE79 360 aa15.68■□□□□ 0.1
PDLIM4-206ENST00000474421 OR5T1Q8NG75 326 aa15.68■□□□□ 0.1
PDLIM4-206ENST00000474421 FCGR1BQ92637 280 aa15.68■□□□□ 0.1
PDLIM4-206ENST00000474421 RANGRFQ9HD47 186 aaPredicted RBP15.68■□□□□ 0.1
PDLIM4-206ENST00000474421 A0A0B4J203 849 aa15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 NOTOA8MTQ0 251 aa15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 SCGNO76038 276 aa15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 SNRPBP14678 240 aaKnown RBP15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 GP9P14770 177 aa15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 SPNP16150 400 aa15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 FGF9P31371 208 aaPredicted RBP15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 PJVKQ0ZLH3 352 aa15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 VMA21Q3ZAQ7 101 aa15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 H1FOOQ8IZA3 346 aaPredicted RBP15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 TEX45Q8NA69 505 aa15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 ASCL2Q99929 193 aa15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 Q9H521 79 aa15.67■□□□□ 0.1
PDLIM4-206ENST00000474421 CTXN2P0C2S0 81 aa15.66■□□□□ 0.1
PDLIM4-206ENST00000474421 AADACP22760 399 aa15.66■□□□□ 0.1
PDLIM4-206ENST00000474421 SSBP2P81877 361 aaPredicted RBP15.66■□□□□ 0.1
PDLIM4-206ENST00000474421 TPRA1Q86W33 373 aa15.66■□□□□ 0.1
PDLIM4-206ENST00000474421 NR2C2APQ86WQ0 139 aa15.66■□□□□ 0.1
PDLIM4-206ENST00000474421 STUB1Q9UNE7 303 aa15.66■□□□□ 0.1
PDLIM4-206ENST00000474421 PSMB9P28065 219 aa15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 DUTP33316 252 aaKnown RBP15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 UBE2KP61086 200 aa15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 CDNFQ49AH0 187 aa15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 HACD4Q5VWC8 232 aa15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 SPARTQ8N0X7 666 aa15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 OSR1Q8TAX0 266 aaPredicted RBP15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 DDB2Q92466 427 aa15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 C5orf30Q96GV9 206 aa15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 PHB2Q99623 299 aa15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 YTHDF1Q9BYJ9 559 aaKnown RBP15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 DCSTAMPQ9H295 470 aa15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 TXNL4BQ9NX01 149 aaKnown RBP15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 TNCP24821 2201 aa15.65■□□□□ 0.1
PDLIM4-206ENST00000474421 SRRM4A7MD48 611 aaKnown RBP15.64■□□□□ 0.09
PDLIM4-206ENST00000474421 CREBL2O60519 120 aaPredicted RBP15.64■□□□□ 0.09
PDLIM4-206ENST00000474421 SLC22A5O76082 557 aa15.64■□□□□ 0.09
PDLIM4-206ENST00000474421 USMG5Q96IX5 58 aa15.64■□□□□ 0.09
PDLIM4-206ENST00000474421 TINAGL1Q9GZM7 467 aaPredicted RBP15.64■□□□□ 0.09
PDLIM4-206ENST00000474421 SSR3Q9UNL2 185 aa15.64■□□□□ 0.09
PDLIM4-206ENST00000474421 STAB2Q8WWQ8 2551 aa15.64■□□□□ 0.09
PDLIM4-206ENST00000474421 CRYZL1O95825 349 aa15.63■□□□□ 0.09
PDLIM4-206ENST00000474421 PRSS8Q16651 343 aa15.63■□□□□ 0.09
PDLIM4-206ENST00000474421 ANKRD13BQ86YJ7 626 aa15.63■□□□□ 0.09
PDLIM4-206ENST00000474421 ZNF645Q8N7E2 425 aa15.63■□□□□ 0.09
PDLIM4-206ENST00000474421 ST6GALNAC5Q9BVH7 336 aa15.63■□□□□ 0.09
PDLIM4-206ENST00000474421 COA4Q9NYJ1 87 aa15.63■□□□□ 0.09
PDLIM4-206ENST00000474421 IGKV1D-8A0A087WSZ0 117 aa15.62■□□□□ 0.09
PDLIM4-206ENST00000474421 SMIM30A4D0T7 59 aa15.62■□□□□ 0.09
PDLIM4-206ENST00000474421 MSGN1A6NI15 193 aa15.62■□□□□ 0.09
PDLIM4-206ENST00000474421 CD36P16671 472 aa15.62■□□□□ 0.09
PDLIM4-206ENST00000474421 CNIH2Q6PI25 160 aa15.62■□□□□ 0.09
PDLIM4-206ENST00000474421 RSRP1Q9BUV0 290 aa15.62■□□□□ 0.09
PDLIM4-206ENST00000474421 DAPK2Q9UIK4 370 aa15.62■□□□□ 0.09
PDLIM4-206ENST00000474421 ELF5Q9UKW6 265 aaPredicted RBP15.62■□□□□ 0.09
PDLIM4-206ENST00000474421 MRPS7Q9Y2R9 242 aaKnown RBP15.62■□□□□ 0.09
PDLIM4-206ENST00000474421 PRELID3BQ9Y3B1 194 aa15.62■□□□□ 0.09
PDLIM4-206ENST00000474421 OR2W1Q9Y3N9 320 aa15.62■□□□□ 0.09
PDLIM4-206ENST00000474421 ANKRD34BA5PLL1 514 aa15.61■□□□□ 0.09
PDLIM4-206ENST00000474421 LINC00473A8K010 186 aa15.61■□□□□ 0.09
PDLIM4-206ENST00000474421 MPPED1O15442 326 aa15.61■□□□□ 0.09
PDLIM4-206ENST00000474421 ACTL6BO94805 426 aa15.61■□□□□ 0.09
PDLIM4-206ENST00000474421 ATP6V1G2O95670 118 aa15.61■□□□□ 0.09
PDLIM4-206ENST00000474421 GNG2P59768 71 aa15.61■□□□□ 0.09
PDLIM4-206ENST00000474421 KLF5Q13887 457 aaPredicted RBP15.61■□□□□ 0.09
PDLIM4-206ENST00000474421 TNXAQ16473 311 aa15.61■□□□□ 0.09
PDLIM4-206ENST00000474421 TATDN3Q17R31 274 aa15.61■□□□□ 0.09
PDLIM4-206ENST00000474421 ZNF343Q6P1L6 599 aa15.61■□□□□ 0.09
PDLIM4-206ENST00000474421 PEF1Q9UBV8 284 aaKnown RBP15.61■□□□□ 0.09
PDLIM4-206ENST00000474421 HUWE1Q7Z6Z7 4374 aaKnown RBP15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 IGLV1-51P01701 117 aa15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 HLA-DQB1P01920 261 aa15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 OR9G9P0C7N8 305 aa15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 FRMD6-AS1P0C7T7 363 aa15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 MRGPRG-AS1Q2M3A8 158 aa15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 SFXN4Q6P4A7 337 aa15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 KCTD9Q7L273 389 aa15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 SBSPONQ8IVN8 264 aa15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 SRSF12Q8WXF0 261 aaKnown RBP15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 ACOT12Q8WYK0 555 aa15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 DCUN1D5Q9BTE7 237 aa15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 RRP15Q9Y3B9 282 aaKnown RBP15.6■□□□□ 0.09
PDLIM4-206ENST00000474421 TMEM235A6NFC5 223 aa15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 C3orf84H3BNL1 204 aa15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 FCGR3BO75015 233 aa15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 NFYAP23511 347 aaPredicted RBP15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 SCAND1P57086 179 aa15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 CDK10Q15131 360 aa15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 IDO2Q6ZQW0 420 aa15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 OVCH2Q7RTZ1 564 aa15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 MMD2Q8IY49 270 aa15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 ADAD2Q8NCV1 583 aaKnown RBP15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 OR9G4Q8NGQ1 327 aa15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 NUDCD2Q8WVJ2 157 aa15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 SPIN2AQ99865 258 aa15.59■□□□□ 0.09
PDLIM4-206ENST00000474421 SPIN2BQ9BPZ2 258 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms