RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 NEDD4LQ96PU5 975 aa5.41□□□□□ -1.54
VPS50-211ENST00000474412 S1PR3Q99500 378 aa5.41□□□□□ -1.54
VPS50-211ENST00000474412 MGLLQ99685 303 aa5.41□□□□□ -1.54
VPS50-211ENST00000474412 ZNF251Q9BRH9 671 aa5.41□□□□□ -1.54
VPS50-211ENST00000474412 PECRQ9BY49 303 aa5.41□□□□□ -1.54
VPS50-211ENST00000474412 KRTAP1-5Q9BYS1 174 aa5.41□□□□□ -1.54
VPS50-211ENST00000474412 ABCG5Q9H222 651 aa5.41□□□□□ -1.54
VPS50-211ENST00000474412 PLGRKTQ9HBL7 147 aa5.41□□□□□ -1.54
VPS50-211ENST00000474412 ZNF107Q9UII5 783 aaPredicted RBP5.41□□□□□ -1.54
VPS50-211ENST00000474412 TNCP24821 2201 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 WI2-2373I1.2A0A1W2PRP0 233 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 NPIPB5A8MRT5 1133 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 G3V318 75 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 K7EIL1 84 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 ATP6V0E1O15342 81 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 LANCL1O43813 399 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 MOSP00540 346 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 SCTP09683 121 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 CD3GP09693 182 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 UBBP0CG47 229 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 CD1BP29016 333 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 TNFSF8P32971 234 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 ACTBP60709 375 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 EMX1Q04741 257 aaPredicted RBP5.4□□□□□ -1.54
VPS50-211ENST00000474412 MMDQ15546 238 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 RAB11BQ15907 218 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 Q3ZCU0 254 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 TRAT1Q6PIZ9 186 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 ZNF367Q7RTV3 350 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 KCNG3Q8TAE7 436 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 CASTOR1Q8WTX7 329 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 CHPT1Q8WUD6 406 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 GNB4Q9HAV0 340 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 CHMP1AQ9HD42 196 aaPredicted RBP5.4□□□□□ -1.54
VPS50-211ENST00000474412 ACOT13Q9NPJ3 140 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 GHRLQ9UBU3 117 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 ELF5Q9UKW6 265 aaPredicted RBP5.4□□□□□ -1.54
VPS50-211ENST00000474412 KCNK7Q9Y2U2 307 aa5.4□□□□□ -1.54
VPS50-211ENST00000474412 A0A075B6Q4 140 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 IGKV1D-8A0A087WSZ0 117 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 IGHV7-81A0A0B4J1V7 117 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 MFNGO00587 321 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 TXNL1O43396 289 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 YPEL1O60688 119 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 CA11O75493 328 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 GLAP06280 429 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 LYL1P12980 280 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 ARSBP15848 533 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 LUMP51884 338 aaPredicted RBP5.39□□□□□ -1.55
VPS50-211ENST00000474412 HTD2P86397 168 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 DEFA5Q01523 94 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 TMEM30BQ3MIR4 351 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 C22orf42Q6IC83 251 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 FOXRED2Q8IWF2 684 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 CADM3Q8N126 398 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 FAM89BQ8N5H3 189 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 DRAXINQ8NBI3 349 aaPredicted RBP5.39□□□□□ -1.55
VPS50-211ENST00000474412 OR2AK2Q8NG84 335 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 FAM3DQ96BQ1 224 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 GALMQ96C23 342 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 YPEL2Q96QA6 119 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 P2RX4Q99571 388 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 FBXL15Q9H469 300 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 RNF167Q9H6Y7 350 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 ISYNA1Q9NPH2 558 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 PARP11Q9NR21 331 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 NECAP2Q9NVZ3 263 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 NDUFB11Q9NX14 153 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 KCNIP1Q9NZI2 227 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 GAB2Q9UQC2 676 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 V9GY05 133 aa5.39□□□□□ -1.55
VPS50-211ENST00000474412 TRBV6-6A0A0A6YYG2 114 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 H0YJW9 148 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 NBR2O15453 112 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 SOX15O60248 233 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 ARL6IP5O75915 188 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 NDUFA3O95167 84 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 FCGR3AP08637 254 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 CT45A6P0DMU7 189 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 CT45A5P0DMU8 189 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 CT45A7P0DMV0 189 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 SOX6P35712 828 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 RAB25P57735 213 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 GABARAPL2P60520 117 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 GNB1P62873 340 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 ECSCRQ19T08 205 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 C2orf76Q3KRA6 126 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 IGSF11Q5DX21 431 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 CD200R1LQ6Q8B3 271 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 MOB1BQ7L9L4 216 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 ZNF554Q86TJ5 538 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 WFDC9Q8NEX5 89 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 C2CD4CQ8TF44 421 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 KCTD7Q96MP8 289 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 OR5B12Q96R08 314 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 RASL11BQ9BPW5 248 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 CMSS1Q9BQ75 279 aaKnown RBP5.38□□□□□ -1.55
VPS50-211ENST00000474412 AGMATQ9BSE5 352 aa5.38□□□□□ -1.55
VPS50-211ENST00000474412 FAM103A1Q9BTL3 118 aaKnown RBP5.38□□□□□ -1.55
VPS50-211ENST00000474412 URM1Q9BTM9 101 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms