RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 NPPCP23582 126 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 ZNF664Q8N3J9 261 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 MRGPRDQ8TDS7 321 aa17.65■□□□□ 0.42
COL18A1-207ENST00000473212 PAX1P15863 534 aa17.64■□□□□ 0.41
COL18A1-207ENST00000473212 CATR1Q13166 79 aa17.64■□□□□ 0.41
COL18A1-207ENST00000473212 PRAMEF6Q5VXH4 476 aa17.64■□□□□ 0.41
COL18A1-207ENST00000473212 KLF13Q9Y2Y9 288 aaPredicted RBP17.64■□□□□ 0.41
COL18A1-207ENST00000473212 TRGV5A0A0B4J1U4 118 aa17.64■□□□□ 0.41
COL18A1-207ENST00000473212 C11orf94C9JXX5 98 aa17.64■□□□□ 0.41
COL18A1-207ENST00000473212 SSTR5P35346 364 aa17.64■□□□□ 0.41
COL18A1-207ENST00000473212 CHRNA7P36544 502 aa17.64■□□□□ 0.41
COL18A1-207ENST00000473212 ACTL10Q5JWF8 245 aa17.64■□□□□ 0.41
COL18A1-207ENST00000473212 ACY3Q96HD9 319 aa17.64■□□□□ 0.41
COL18A1-207ENST00000473212 OBP2BQ9NPH6 170 aa17.64■□□□□ 0.41
COL18A1-207ENST00000473212 AURKAIP1Q9NWT8 199 aaPredicted RBP17.64■□□□□ 0.41
COL18A1-207ENST00000473212 HEATR1Q9H583 2144 aaKnown RBP17.64■□□□□ 0.41
COL18A1-207ENST00000473212 MKRN2OSH3BPM6 223 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 KLRC4-KLRK1H3BQV0 150 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 EGR1P18146 543 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 LTC4SQ16873 150 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 ZNF766Q5HY98 468 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 H2BFWTQ7Z2G1 175 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 COQ2Q96H96 371 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 MRPL37Q9BZE1 423 aaKnown RBP17.63■□□□□ 0.41
COL18A1-207ENST00000473212 GGCTO75223 188 aaKnown RBP17.63■□□□□ 0.41
COL18A1-207ENST00000473212 TNFSF15O95150 251 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 CRYAAP02489 173 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 TMEM164Q5U3C3 297 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 C11orf53Q8IXP5 236 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 NINJ1Q92982 152 aa17.63■□□□□ 0.41
COL18A1-207ENST00000473212 C21orf140B9A014 251 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 CLDN14O95500 239 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 CD59P13987 128 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 COL8A2P25067 703 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 PDLIM4P50479 330 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 SSTP61278 116 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 ARG2P78540 354 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 KLF14Q8TD94 323 aaPredicted RBP17.62■□□□□ 0.41
COL18A1-207ENST00000473212 OR6C3Q9NZP0 311 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 A8MWP6 167 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 RAB29O14966 203 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 NDUFB7P17568 137 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 CDC34P49427 236 aaPredicted RBP17.62■□□□□ 0.41
COL18A1-207ENST00000473212 GNB2P62879 340 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 SRSF6Q13247 344 aaKnown RBP17.62■□□□□ 0.41
COL18A1-207ENST00000473212 GCSAMLQ5JQS6 135 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 MSL2Q9HCI7 577 aa17.62■□□□□ 0.41
COL18A1-207ENST00000473212 OOEPA6NGQ2 149 aa17.61■□□□□ 0.41
COL18A1-207ENST00000473212 LINC00473A8K010 186 aa17.61■□□□□ 0.41
COL18A1-207ENST00000473212 SLC31A2O15432 143 aa17.61■□□□□ 0.41
COL18A1-207ENST00000473212 SRP14P37108 136 aaKnown RBP17.61■□□□□ 0.41
COL18A1-207ENST00000473212 GABRA2P47869 451 aa17.61■□□□□ 0.41
COL18A1-207ENST00000473212 UBE2G2P60604 165 aa17.61■□□□□ 0.41
COL18A1-207ENST00000473212 MRPL49Q13405 166 aaKnown RBP17.61■□□□□ 0.41
COL18A1-207ENST00000473212 VWC2Q2TAL6 325 aa17.61■□□□□ 0.41
COL18A1-207ENST00000473212 FIP1L1Q6UN15 594 aaKnown RBP17.61■□□□□ 0.41
COL18A1-207ENST00000473212 CIB3Q96Q77 187 aaPredicted RBP17.61■□□□□ 0.41
COL18A1-207ENST00000473212 DMXL1Q9Y485 3027 aa17.61■□□□□ 0.41
COL18A1-207ENST00000473212 VENTXO95231 258 aa17.61■□□□□ 0.41
COL18A1-207ENST00000473212 IGHV3-13P01766 116 aa17.61■□□□□ 0.41
COL18A1-207ENST00000473212 IGHV3-7P01780 117 aa17.61■□□□□ 0.41
COL18A1-207ENST00000473212 UBE2NP61088 152 aaKnown RBP17.61■□□□□ 0.41
COL18A1-207ENST00000473212 DMRTC2Q8IXT2 367 aaPredicted RBP17.61■□□□□ 0.41
COL18A1-207ENST00000473212 INTS1Q8N201 2190 aaKnown RBP17.61■□□□□ 0.41
COL18A1-207ENST00000473212 TRAV38-1A0A0B4J264 116 aa17.6■□□□□ 0.41
COL18A1-207ENST00000473212 C17orf112F2Z3M2 114 aa17.6■□□□□ 0.41
COL18A1-207ENST00000473212 ACOT6Q3I5F7 207 aaPredicted RBP17.6■□□□□ 0.41
COL18A1-207ENST00000473212 FAM78BQ5VT40 261 aa17.6■□□□□ 0.41
COL18A1-207ENST00000473212 MISP3Q96FF7 219 aa17.6■□□□□ 0.41
COL18A1-207ENST00000473212 DCHS1Q96JQ0 3298 aa17.6■□□□□ 0.41
COL18A1-207ENST00000473212 ST8SIA5O15466 376 aa17.6■□□□□ 0.41
COL18A1-207ENST00000473212 GCGP01275 180 aa17.6■□□□□ 0.41
COL18A1-207ENST00000473212 SNRPCP09234 159 aaKnown RBP17.6■□□□□ 0.41
COL18A1-207ENST00000473212 SLC35E4Q6ICL7 350 aa17.6■□□□□ 0.41
COL18A1-207ENST00000473212 CISD2Q8N5K1 135 aaKnown RBP17.6■□□□□ 0.41
COL18A1-207ENST00000473212 HES4Q9HCC6 221 aa17.6■□□□□ 0.41
COL18A1-207ENST00000473212 HCFC1P51610 2035 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 CDX4O14627 284 aaPredicted RBP17.59■□□□□ 0.41
COL18A1-207ENST00000473212 ATP5G3P48201 142 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 GNB1P62873 340 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 Q3ZCU0 254 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 CST9LP1Q5W188 147 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 KCNIP4Q6PIL6 250 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 Q8N7P7 452 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 OR13A1Q8NGR1 328 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 IQCF6A8MYZ5 107 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 TYMSP04818 313 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 CD46P15529 392 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 LINC01551Q86U37 167 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 CNEP1R1Q8N9A8 125 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 WFIKKN1Q96NZ8 548 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 DERL1Q9BUN8 251 aa17.59■□□□□ 0.41
COL18A1-207ENST00000473212 QTRT1Q9BXR0 403 aaKnown RBP17.59■□□□□ 0.41
COL18A1-207ENST00000473212 EP300Q09472 2414 aaPredicted RBP17.58■□□□□ 0.41
COL18A1-207ENST00000473212 C15orf62A8K5M9 175 aa17.58■□□□□ 0.41
COL18A1-207ENST00000473212 IL3RAP26951 378 aa17.58■□□□□ 0.41
COL18A1-207ENST00000473212 TAS2R60P59551 318 aa17.58■□□□□ 0.41
COL18A1-207ENST00000473212 GABRA6Q16445 453 aa17.58■□□□□ 0.41
COL18A1-207ENST00000473212 TMEM18Q96B42 140 aa17.58■□□□□ 0.41
COL18A1-207ENST00000473212 NOL4LQ96MY1 436 aaPredicted RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms