RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 UCP3P55916 312 aa16.46■□□□□ 0.23
TOP3A-204ENST00000472959 RPL30P62888 115 aaKnown RBP16.46■□□□□ 0.23
TOP3A-204ENST00000472959 LIN54Q6MZP7 749 aa16.46■□□□□ 0.23
TOP3A-204ENST00000472959 CMTM1Q8IZ96 169 aa16.46■□□□□ 0.23
TOP3A-204ENST00000472959 KLHDC1Q8N7A1 406 aa16.46■□□□□ 0.23
TOP3A-204ENST00000472959 TCTEX1D2Q8WW35 142 aa16.46■□□□□ 0.23
TOP3A-204ENST00000472959 FXYD6Q9H0Q3 95 aa16.46■□□□□ 0.23
TOP3A-204ENST00000472959 FBN3Q75N90 2809 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 ANKRD20A5PA0PJZ0 165 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 SHOXO15266 292 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 HLA-DRB1P01911 266 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 AKAIN1P0CW23 69 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 VSIG10L2P0DP72 767 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 CATR1Q13166 79 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 PSG5Q15238 335 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 ZNF79Q15937 498 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 TMEM95Q3KNT9 176 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 AADACL3Q5VUY0 350 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 FOXRED2Q8IWF2 684 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 Q8N402 240 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 OSR1Q8TAX0 266 aaPredicted RBP16.45■□□□□ 0.22
TOP3A-204ENST00000472959 HARBI1Q96MB7 349 aa16.45■□□□□ 0.22
TOP3A-204ENST00000472959 GPR31O00270 319 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 TNFSF12O43508 249 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 FCGR3BO75015 233 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 CRYZL1O95825 349 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 S100GP29377 79 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 PLGLAQ15195 96 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 CNPY1Q3B7I2 92 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 LHFPL1Q86WI0 220 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 SLC38A6Q8IZM9 456 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 OR4D10Q8NGI6 311 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 OR4S2Q8NH73 311 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 TERB2Q8NHR7 220 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 CITED1Q99966 193 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 FBXL15Q9H469 300 aa16.44■□□□□ 0.22
TOP3A-204ENST00000472959 METTL1Q9UBP6 276 aaKnown RBP16.44■□□□□ 0.22
TOP3A-204ENST00000472959 TENM1Q9UKZ4 2725 aa16.43■□□□□ 0.22
TOP3A-204ENST00000472959 DISC1C4P0D8 188 aa16.43■□□□□ 0.22
TOP3A-204ENST00000472959 AP4M1O00189 453 aa16.43■□□□□ 0.22
TOP3A-204ENST00000472959 IGLV2-23P01705 113 aa16.43■□□□□ 0.22
TOP3A-204ENST00000472959 AP3S2P59780 193 aa16.43■□□□□ 0.22
TOP3A-204ENST00000472959 KRTAP10-3P60369 221 aa16.43■□□□□ 0.22
TOP3A-204ENST00000472959 LINC00299Q6ZSB3 139 aa16.43■□□□□ 0.22
TOP3A-204ENST00000472959 CENPVQ7Z7K6 275 aaPredicted RBP16.43■□□□□ 0.22
TOP3A-204ENST00000472959 WIPF2Q8TF74 440 aaPredicted RBP16.43■□□□□ 0.22
TOP3A-204ENST00000472959 RSRP1Q9BUV0 290 aa16.43■□□□□ 0.22
TOP3A-204ENST00000472959 RBFOX2O43251 390 aaKnown RBP eCLIP16.42■□□□□ 0.22
TOP3A-204ENST00000472959 PGLYRP1O75594 196 aaPredicted RBP16.42■□□□□ 0.22
TOP3A-204ENST00000472959 ZNF735P0CB33 412 aa16.42■□□□□ 0.22
TOP3A-204ENST00000472959 OR2B11Q5JQS5 317 aa16.42■□□□□ 0.22
TOP3A-204ENST00000472959 GDPD1Q8N9F7 314 aa16.42■□□□□ 0.22
TOP3A-204ENST00000472959 POC5Q8NA72 575 aa16.42■□□□□ 0.22
TOP3A-204ENST00000472959 CD300LFQ8TDQ1 290 aa16.42■□□□□ 0.22
TOP3A-204ENST00000472959 CHPT1Q8WUD6 406 aa16.42■□□□□ 0.22
TOP3A-204ENST00000472959 TRIM63Q969Q1 353 aa16.42■□□□□ 0.22
TOP3A-204ENST00000472959 GPHA2Q96T91 129 aa16.42■□□□□ 0.22
TOP3A-204ENST00000472959 HSPB9Q9BQS6 159 aa16.42■□□□□ 0.22
TOP3A-204ENST00000472959 SRRQ9GZT4 340 aa16.42■□□□□ 0.22
TOP3A-204ENST00000472959 ZNF580Q9UK33 172 aa16.42■□□□□ 0.22
TOP3A-204ENST00000472959 LINC01548A6NM66 108 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 SRRM4A7MD48 611 aaKnown RBP16.41■□□□□ 0.22
TOP3A-204ENST00000472959 SLC25A17O43808 307 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 ECI1P42126 302 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 BRWD1-AS2P59051 145 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 UBE2KP61086 200 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 ZNF45Q02386 682 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 VMA21Q3ZAQ7 101 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 SCGB2B2Q4G0G5 96 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 SPAG16Q8N0X2 631 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 OR4C16Q8NGL9 310 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 DEDD2Q8WXF8 326 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 ZNF486Q96H40 463 aaPredicted RBP16.41■□□□□ 0.22
TOP3A-204ENST00000472959 PRRT1Q99946 306 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 AIFM2Q9BRQ8 373 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 GON7Q9BXV9 100 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 OR51J1Q9H342 316 aa16.41■□□□□ 0.22
TOP3A-204ENST00000472959 IGHV7-81A0A0B4J1V7 117 aa16.4■□□□□ 0.22
TOP3A-204ENST00000472959 IGF1P05019 195 aa16.4■□□□□ 0.22
TOP3A-204ENST00000472959 CRYGBP07316 175 aa16.4■□□□□ 0.22
TOP3A-204ENST00000472959 PGAM2P15259 253 aa16.4■□□□□ 0.22
TOP3A-204ENST00000472959 FAUP35544 74 aaKnown RBP16.4■□□□□ 0.22
TOP3A-204ENST00000472959 SRSF4Q08170 494 aaKnown RBP16.4■□□□□ 0.22
TOP3A-204ENST00000472959 PPP1R27Q86WC6 154 aa16.4■□□□□ 0.22
TOP3A-204ENST00000472959 STPG2Q8N412 459 aa16.4■□□□□ 0.22
TOP3A-204ENST00000472959 TCTEX1D1Q8N7M0 179 aa16.4■□□□□ 0.22
TOP3A-204ENST00000472959 TEX45Q8NA69 505 aa16.4■□□□□ 0.22
TOP3A-204ENST00000472959 OR5AU1Q8NGC0 362 aa16.4■□□□□ 0.22
TOP3A-204ENST00000472959 OR51H1Q8NH63 302 aa16.4■□□□□ 0.22
TOP3A-204ENST00000472959 ZFAND1Q8TCF1 268 aa16.4■□□□□ 0.22
TOP3A-204ENST00000472959 FCN1O00602 326 aa16.39■□□□□ 0.21
TOP3A-204ENST00000472959 HRASP01112 189 aa16.39■□□□□ 0.21
TOP3A-204ENST00000472959 RLN1P04808 185 aa16.39■□□□□ 0.21
TOP3A-204ENST00000472959 SLC35B1P78383 322 aa16.39■□□□□ 0.21
TOP3A-204ENST00000472959 CX3CL1P78423 397 aa16.39■□□□□ 0.21
TOP3A-204ENST00000472959 KLF9Q13886 244 aaPredicted RBP16.39■□□□□ 0.21
TOP3A-204ENST00000472959 PHLDA2Q53GA4 152 aa16.39■□□□□ 0.21
TOP3A-204ENST00000472959 FAAP20Q6NZ36 180 aa16.39■□□□□ 0.21
TOP3A-204ENST00000472959 ZNF562Q6V9R5 426 aa16.39■□□□□ 0.21
TOP3A-204ENST00000472959 TOMM5Q8N4H5 51 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms