RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 NPYP01303 97 aa1.45□□□□□ -2.18
CLK1-209ENST00000472679 CCR2P41597 374 aa1.45□□□□□ -2.18
CLK1-209ENST00000472679 TMEM258P61165 79 aa1.45□□□□□ -2.18
CLK1-209ENST00000472679 BTN3A2P78410 334 aa1.45□□□□□ -2.18
CLK1-209ENST00000472679 GNA12Q03113 381 aa1.45□□□□□ -2.18
CLK1-209ENST00000472679 GLO1Q04760 184 aa1.45□□□□□ -2.18
CLK1-209ENST00000472679 SLC37A2Q8TED4 501 aa1.45□□□□□ -2.18
CLK1-209ENST00000472679 VCX3BQ9H321 246 aa1.45□□□□□ -2.18
CLK1-209ENST00000472679 BABAM2Q9NXR7 383 aa1.45□□□□□ -2.18
CLK1-209ENST00000472679 PCYT1BQ9Y5K3 369 aaPredicted RBP1.45□□□□□ -2.18
CLK1-209ENST00000472679 GRIN2BQ13224 1484 aa1.44□□□□□ -2.18
CLK1-209ENST00000472679 A0A087WUU8 490 aa1.44□□□□□ -2.18
CLK1-209ENST00000472679 ZNF737O75373 536 aa1.44□□□□□ -2.18
CLK1-209ENST00000472679 RPL27AP46776 148 aaKnown RBP1.44□□□□□ -2.18
CLK1-209ENST00000472679 FABP5Q01469 135 aa1.44□□□□□ -2.18
CLK1-209ENST00000472679 TMEM155Q4W5P6 130 aa1.44□□□□□ -2.18
CLK1-209ENST00000472679 MS4A6EQ96DS6 147 aa1.44□□□□□ -2.18
CLK1-209ENST00000472679 HSPB9Q9BQS6 159 aa1.44□□□□□ -2.18
CLK1-209ENST00000472679 IGHV3-64A0A075B6Q5 118 aa1.43□□□□□ -2.18
CLK1-209ENST00000472679 TMEM213A2RRL7 107 aa1.43□□□□□ -2.18
CLK1-209ENST00000472679 OR6C6A6NF89 314 aa1.43□□□□□ -2.18
CLK1-209ENST00000472679 IFNGR2P38484 337 aa1.43□□□□□ -2.18
CLK1-209ENST00000472679 RETNLBQ9BQ08 111 aa1.43□□□□□ -2.18
CLK1-209ENST00000472679 TMEM109Q9BVC6 243 aa1.43□□□□□ -2.18
CLK1-209ENST00000472679 MS4A6AQ9H2W1 248 aa1.43□□□□□ -2.18
CLK1-209ENST00000472679 A0A1W2PP64 1363 aa1.43□□□□□ -2.18
CLK1-209ENST00000472679 PTPRBP23467 1997 aa1.43□□□□□ -2.18
CLK1-209ENST00000472679 TMED7-TICAM2A0A0A6YYA0 188 aa1.42□□□□□ -2.18
CLK1-209ENST00000472679 ERICH2A1L162 156 aa1.42□□□□□ -2.18
CLK1-209ENST00000472679 MT-CO2P00403 227 aa1.42□□□□□ -2.18
CLK1-209ENST00000472679 TBPL1P62380 186 aa1.42□□□□□ -2.18
CLK1-209ENST00000472679 SAPCD1Q5SSQ6 148 aa1.42□□□□□ -2.18
CLK1-209ENST00000472679 OR1L8Q8NGR8 309 aa1.42□□□□□ -2.18
CLK1-209ENST00000472679 TIPINQ9BVW5 301 aa1.42□□□□□ -2.18
CLK1-209ENST00000472679 TMEM222Q9H0R3 208 aa1.42□□□□□ -2.18
CLK1-209ENST00000472679 DICER1Q9UPY3 1922 aaKnown RBP1.41□□□□□ -2.18
CLK1-209ENST00000472679 FAM25EA8MYX2 175 aa1.41□□□□□ -2.18
CLK1-209ENST00000472679 STX10O60499 249 aa1.41□□□□□ -2.18
CLK1-209ENST00000472679 PET100P0DJ07 73 aa1.41□□□□□ -2.18
CLK1-209ENST00000472679 SPATA24Q86W54 205 aa1.41□□□□□ -2.18
CLK1-209ENST00000472679 GPHB5Q86YW7 130 aa1.41□□□□□ -2.18
CLK1-209ENST00000472679 OR13C8Q8NGS7 320 aa1.41□□□□□ -2.18
CLK1-209ENST00000472679 ZNF675Q8TD23 568 aa1.41□□□□□ -2.18
CLK1-209ENST00000472679 C12orf43Q96C57 262 aaKnown RBP1.41□□□□□ -2.18
CLK1-209ENST00000472679 NDEL1Q9GZM8 345 aa1.41□□□□□ -2.18
CLK1-209ENST00000472679 SLC22A4Q9H015 551 aa1.41□□□□□ -2.18
CLK1-209ENST00000472679 RBM7Q9Y580 266 aaKnown RBP1.41□□□□□ -2.18
CLK1-209ENST00000472679 ABCC12Q96J65 1359 aa1.41□□□□□ -2.18
CLK1-209ENST00000472679 MALRD1Q5VYJ5 2156 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 NPPAP01160 153 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 IL6P05231 212 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 HLA-DQB2P05538 268 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 DEFA4P12838 97 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 GPX2P18283 190 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 CTBP2P56545 445 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 HLA-DRB3P79483 266 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 JOSD1Q15040 202 aaPredicted RBP1.4□□□□□ -2.19
CLK1-209ENST00000472679 TMEM42Q69YG0 159 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 DNM1P34Q6PK57 102 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 C10orf105Q8TEF2 133 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 Q96M85 177 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 C8orf4Q9NR00 106 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 FREM1Q5H8C1 2179 aa1.4□□□□□ -2.19
CLK1-209ENST00000472679 SIPA1L1O43166 1804 aa1.39□□□□□ -2.19
CLK1-209ENST00000472679 TRBV6-5A0A0K0K1A5 114 aa1.39□□□□□ -2.19
CLK1-209ENST00000472679 TINCRA0A1B0GVN0 87 aa1.39□□□□□ -2.19
CLK1-209ENST00000472679 C9JCJ5 164 aa1.39□□□□□ -2.19
CLK1-209ENST00000472679 KLRC4O43908 158 aa1.39□□□□□ -2.19
CLK1-209ENST00000472679 CA5AP35218 305 aa1.39□□□□□ -2.19
CLK1-209ENST00000472679 RPS24P62847 133 aaKnown RBP1.39□□□□□ -2.19
CLK1-209ENST00000472679 HOXC5Q00444 222 aa1.39□□□□□ -2.19
CLK1-209ENST00000472679 SLC36A2Q495M3 483 aa1.39□□□□□ -2.19
CLK1-209ENST00000472679 KTN1-AS1Q86SY8 53 aa1.39□□□□□ -2.19
CLK1-209ENST00000472679 ASB13Q8WXK3 278 aa1.39□□□□□ -2.19
CLK1-209ENST00000472679 WDR54Q9H977 334 aa1.39□□□□□ -2.19
CLK1-209ENST00000472679 IGKV1D-43A0A0B4J1Z2 117 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 TEX50A0A1B0GTY4 177 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 ATP8B1O43520 1251 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 MIAQ16674 131 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 LYZL1Q6UWQ5 148 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 FUNDC1Q8IVP5 155 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 CD302Q8IX05 232 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 IMMP2LQ96T52 175 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 CYSTM1Q9H1C7 97 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 SPACA1Q9HBV2 294 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 ANGPT4Q9Y264 503 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 MYH11P35749 1972 aa1.38□□□□□ -2.19
CLK1-209ENST00000472679 CPAMD8Q8IZJ3 1885 aa1.37□□□□□ -2.19
CLK1-209ENST00000472679 BAZ2BQ9UIF8 2168 aaKnown RBP1.37□□□□□ -2.19
CLK1-209ENST00000472679 C5orf49A4QMS7 147 aa1.37□□□□□ -2.19
CLK1-209ENST00000472679 GOLGA6L10A6NI86 522 aa1.37□□□□□ -2.19
CLK1-209ENST00000472679 AQP4P55087 323 aa1.37□□□□□ -2.19
CLK1-209ENST00000472679 EBPQ15125 230 aaKnown RBP1.37□□□□□ -2.19
CLK1-209ENST00000472679 NNATQ16517 81 aa1.37□□□□□ -2.19
CLK1-209ENST00000472679 SDHAF4Q5VUM1 108 aa1.37□□□□□ -2.19
CLK1-209ENST00000472679 FAM19A5Q7Z5A7 132 aaPredicted RBP1.37□□□□□ -2.19
CLK1-209ENST00000472679 RAB2BQ8WUD1 216 aa1.37□□□□□ -2.19
CLK1-209ENST00000472679 RNF133Q8WVZ7 376 aa1.37□□□□□ -2.19
CLK1-209ENST00000472679 DERL2Q9GZP9 239 aa1.37□□□□□ -2.19
CLK1-209ENST00000472679 CHMP4BQ9H444 224 aaKnown RBP1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms