RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 HRH1P35367 487 aa11.26□□□□□ -0.61
ABCF3-209ENST00000472608 LGALS7P47929 136 aa11.26□□□□□ -0.61
ABCF3-209ENST00000472608 EIF4EBP1Q13541 118 aaPredicted RBP11.26□□□□□ -0.61
ABCF3-209ENST00000472608 MMDQ15546 238 aa11.26□□□□□ -0.61
ABCF3-209ENST00000472608 ARSJQ5FYB0 599 aaPredicted RBP11.26□□□□□ -0.61
ABCF3-209ENST00000472608 DEFB121Q5J5C9 76 aa11.26□□□□□ -0.61
ABCF3-209ENST00000472608 ZNF66Q6ZN08 573 aa11.26□□□□□ -0.61
ABCF3-209ENST00000472608 OR6F1Q8NGZ6 308 aa11.26□□□□□ -0.61
ABCF3-209ENST00000472608 SMIM4Q8WVI0 70 aa11.26□□□□□ -0.61
ABCF3-209ENST00000472608 FLYWCH2Q96CP2 140 aaKnown RBP11.26□□□□□ -0.61
ABCF3-209ENST00000472608 RITA1Q96K30 269 aa11.26□□□□□ -0.61
ABCF3-209ENST00000472608 HSD17B10Q99714 261 aaKnown RBP11.26□□□□□ -0.61
ABCF3-209ENST00000472608 SLC35D1Q9NTN3 355 aa11.26□□□□□ -0.61
ABCF3-209ENST00000472608 KIAA1456Q9P272 454 aa11.26□□□□□ -0.61
ABCF3-209ENST00000472608 FABP12A6NFH5 140 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 GSTZ1O43708 216 aaPredicted RBP11.25□□□□□ -0.61
ABCF3-209ENST00000472608 FBXO24O75426 580 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 PTBP1P26599 531 aaKnown RBP eCLIP11.25□□□□□ -0.61
ABCF3-209ENST00000472608 S100A5P33763 92 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 LINC00205P59089 165 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 HERV-K104P61576 105 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 CD69Q07108 199 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 CBX3Q13185 183 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 IL18Q14116 193 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 RTL8BQ17RB0 113 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 C5orf64Q2M2E5 130 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 TMEM177Q53S58 311 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 TMEM229BQ8NBD8 167 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 MOB3AQ96BX8 217 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 TSNAXQ99598 290 aaKnown RBP11.25□□□□□ -0.61
ABCF3-209ENST00000472608 ZNF2Q9BSG1 426 aaPredicted RBP11.25□□□□□ -0.61
ABCF3-209ENST00000472608 SLC5A7Q9GZV3 580 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 PRELID3BQ9Y3B1 194 aa11.25□□□□□ -0.61
ABCF3-209ENST00000472608 STAB2Q8WWQ8 2551 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 LINC00473A8K010 186 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 C3orf84H3BNL1 204 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 J3QRK9 145 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 RRHO14718 337 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 PEX14O75381 377 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 CD74P04233 296 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 IGKV1-16P04430 117 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 CD28P10747 220 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 KRTAP10-11P60412 298 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 TSPAN5P62079 268 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 DGCR2P98153 550 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 C9orf152Q5JTZ5 239 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 LPCAT3Q6P1A2 487 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 SLC35E3Q7Z769 313 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 MFSD4AQ8N468 514 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 ARRDC1Q8N5I2 433 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 SECTM1Q8WVN6 248 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 TAS2R8Q9NYW2 309 aa11.24□□□□□ -0.61
ABCF3-209ENST00000472608 SH2D7A6NKC9 451 aaPredicted RBP11.23□□□□□ -0.61
ABCF3-209ENST00000472608 AP4M1O00189 453 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 CD3DP04234 171 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 VSIG10L2P0DP72 767 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 CNTFRP26992 372 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 GNRHRP30968 328 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 ETV6P41212 452 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 UCP3P55916 312 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 TAS2R19P59542 299 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 RPS16P62249 146 aaKnown RBP11.23□□□□□ -0.61
ABCF3-209ENST00000472608 EGFEM1PQ0D2K5 195 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 PSG5Q15238 335 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 RNASE10Q5GAN6 216 aaKnown RBP11.23□□□□□ -0.61
ABCF3-209ENST00000472608 LIN54Q6MZP7 749 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 KCTD9Q7L273 389 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 CCDC190Q86UF4 302 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 TMEM17Q86X19 198 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 FOXRED2Q8IWF2 684 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 BVESQ8NE79 360 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 OSR1Q8TAX0 266 aaPredicted RBP11.23□□□□□ -0.61
ABCF3-209ENST00000472608 CHPT1Q8WUD6 406 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 CITED2Q99967 270 aaPredicted RBP11.23□□□□□ -0.61
ABCF3-209ENST00000472608 CCL28Q9NRJ3 127 aa11.23□□□□□ -0.61
ABCF3-209ENST00000472608 IFNA6P05013 189 aa11.22□□□□□ -0.61
ABCF3-209ENST00000472608 IGF1P05019 195 aa11.22□□□□□ -0.61
ABCF3-209ENST00000472608 CD33P20138 364 aa11.22□□□□□ -0.61
ABCF3-209ENST00000472608 KIR2DS2P43631 304 aa11.22□□□□□ -0.61
ABCF3-209ENST00000472608 FXYD4P59646 89 aa11.22□□□□□ -0.61
ABCF3-209ENST00000472608 RPL30P62888 115 aaKnown RBP11.22□□□□□ -0.61
ABCF3-209ENST00000472608 TMEM95Q3KNT9 176 aa11.22□□□□□ -0.61
ABCF3-209ENST00000472608 CENPVQ7Z7K6 275 aaPredicted RBP11.22□□□□□ -0.61
ABCF3-209ENST00000472608 RBMXL1Q96E39 390 aaKnown RBP11.22□□□□□ -0.61
ABCF3-209ENST00000472608 GON7Q9BXV9 100 aa11.22□□□□□ -0.61
ABCF3-209ENST00000472608 KRTAP17-1Q9BYP8 105 aa11.22□□□□□ -0.61
ABCF3-209ENST00000472608 A6NHS1 94 aa11.21□□□□□ -0.61
ABCF3-209ENST00000472608 SHOXO15266 292 aa11.21□□□□□ -0.61
ABCF3-209ENST00000472608 RBFOX2O43251 390 aaKnown RBP eCLIP11.21□□□□□ -0.61
ABCF3-209ENST00000472608 IGLV2-23P01705 113 aa11.21□□□□□ -0.61
ABCF3-209ENST00000472608 NHLRC4P0CG21 123 aaPredicted RBP11.21□□□□□ -0.61
ABCF3-209ENST00000472608 CATR1Q13166 79 aa11.21□□□□□ -0.61
ABCF3-209ENST00000472608 MEF2DQ14814 521 aa11.21□□□□□ -0.61
ABCF3-209ENST00000472608 RNASE12Q5GAN4 147 aaKnown RBP11.21□□□□□ -0.61
ABCF3-209ENST00000472608 STEAP1BQ6NZ63 245 aa11.21□□□□□ -0.61
ABCF3-209ENST00000472608 ZNF562Q6V9R5 426 aa11.21□□□□□ -0.61
ABCF3-209ENST00000472608 ZNF818PQ6ZRF7 136 aa11.21□□□□□ -0.61
ABCF3-209ENST00000472608 LHFPL1Q86WI0 220 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms