RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 SNAPC3Q92966 411 aa11.78□□□□□ -0.52
CALD1-215ENST00000472096 HARBI1Q96MB7 349 aa11.78□□□□□ -0.52
CALD1-215ENST00000472096 PRKDCP78527 4128 aaKnown RBP11.77□□□□□ -0.52
CALD1-215ENST00000472096 MEIS3P1A6NDR6 274 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 CA2P00918 260 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 IGLV2-14P01704 120 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 RRASP10301 218 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 CBX3Q13185 183 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 ECSCRQ19T08 205 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 TMEM177Q53S58 311 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 KPRPQ5T749 579 aaPredicted RBP11.77□□□□□ -0.53
CALD1-215ENST00000472096 GPR107Q5VW38 600 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 LINC00482Q8N8I6 264 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 WFDC9Q8NEX5 89 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 MYOZ3Q8TDC0 251 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 CLCC1Q96S66 551 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 COMMD3Q9UBI1 195 aa11.77□□□□□ -0.53
CALD1-215ENST00000472096 RBMX2Q9Y388 322 aaKnown RBP11.77□□□□□ -0.53
CALD1-215ENST00000472096 SHOXO15266 292 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 SLC22A5O76082 557 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 IGLV1-40P01703 118 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 APOA1P02647 267 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 FCER2P06734 321 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 LGALS7P47929 136 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 GPR141Q7Z602 305 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 MRPL41Q8IXM3 137 aaKnown RBP11.76□□□□□ -0.53
CALD1-215ENST00000472096 MINDY2Q8NBR6 621 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 ABHD5Q8WTS1 349 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 ACOT12Q8WYK0 555 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 CMTM3Q96MX0 182 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 IFT46Q9NQC8 304 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 NECAP2Q9NVZ3 263 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 ANAPC10Q9UM13 185 aa11.76□□□□□ -0.53
CALD1-215ENST00000472096 CRYZL1O95825 349 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 CRYGBP07316 175 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 EGR2P11161 476 aaPredicted RBP11.75□□□□□ -0.53
CALD1-215ENST00000472096 IGLL1P15814 213 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 AADACP22760 399 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 FCGR2CP31995 323 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 MYCNOSP40205 109 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 CDX1P47902 265 aaPredicted RBP11.75□□□□□ -0.53
CALD1-215ENST00000472096 RORCP51449 518 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 DEFB136Q30KP8 78 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 PDLIM3Q53GG5 364 aaPredicted RBP11.75□□□□□ -0.53
CALD1-215ENST00000472096 ZNF562Q6V9R5 426 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 KCTD9Q7L273 389 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 OVCH2Q7RTZ1 564 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 PPP1R27Q86WC6 154 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 TCTEX1D1Q8N7M0 179 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 OR5AP2Q8NGF4 316 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 ARPC1AQ92747 370 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 P2RX4Q99571 388 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 FAM103A1Q9BTL3 118 aaKnown RBP11.75□□□□□ -0.53
CALD1-215ENST00000472096 A3GALT2U3KPV4 340 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 DNAH3Q8TD57 4116 aa11.75□□□□□ -0.53
CALD1-215ENST00000472096 A0A1W2PN81 502 aa11.74□□□□□ -0.53
CALD1-215ENST00000472096 SRRM4A7MD48 611 aaKnown RBP11.74□□□□□ -0.53
CALD1-215ENST00000472096 ARPC1BO15143 372 aaKnown RBP11.74□□□□□ -0.53
CALD1-215ENST00000472096 SOX15O60248 233 aa11.74□□□□□ -0.53
CALD1-215ENST00000472096 PPYP01298 95 aa11.74□□□□□ -0.53
CALD1-215ENST00000472096 CHRNA7P36544 502 aa11.74□□□□□ -0.53
CALD1-215ENST00000472096 RPL30P62888 115 aaKnown RBP11.74□□□□□ -0.53
CALD1-215ENST00000472096 SSBP2P81877 361 aaPredicted RBP11.74□□□□□ -0.53
CALD1-215ENST00000472096 EIF4EBP1Q13541 118 aaPredicted RBP11.74□□□□□ -0.53
CALD1-215ENST00000472096 CDK10Q15131 360 aa11.74□□□□□ -0.53
CALD1-215ENST00000472096 OSR1Q8TAX0 266 aaPredicted RBP11.74□□□□□ -0.53
CALD1-215ENST00000472096 C4orf3Q8WVX3 66 aa11.74□□□□□ -0.53
CALD1-215ENST00000472096 RCC1LQ96I51 464 aaKnown RBP11.74□□□□□ -0.53
CALD1-215ENST00000472096 RAX2Q96IS3 184 aa11.74□□□□□ -0.53
CALD1-215ENST00000472096 DUX3Q96PT4 197 aa11.74□□□□□ -0.53
CALD1-215ENST00000472096 KLK15Q9H2R5 256 aa11.74□□□□□ -0.53
CALD1-215ENST00000472096 FOXA2Q9Y261 457 aaPredicted RBP11.74□□□□□ -0.53
CALD1-215ENST00000472096 NUBP2Q9Y5Y2 271 aa11.74□□□□□ -0.53
CALD1-215ENST00000472096 HPGDSO60760 199 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 FCGR3BO75015 233 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 NAT1P18440 290 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 ELK1P19419 428 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 TMEM267Q0VDI3 215 aaPredicted RBP11.73□□□□□ -0.53
CALD1-215ENST00000472096 PJVKQ0ZLH3 352 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 KIAA0141Q14154 515 aaPredicted RBP11.73□□□□□ -0.53
CALD1-215ENST00000472096 FXYD3Q14802 87 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 MSMO1Q15800 293 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 VMA21Q3ZAQ7 101 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 OR2B11Q5JQS5 317 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 TMEM65Q6PI78 240 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 UNQ5815/PRO19632Q6UWF5 114 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 ZNF491Q8N8L2 437 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 GRPEL2Q8TAA5 225 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 SECTM1Q8WVN6 248 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 AP3S1Q92572 193 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 HSD17B10Q99714 261 aaKnown RBP11.73□□□□□ -0.53
CALD1-215ENST00000472096 MRPS7Q9Y2R9 242 aaKnown RBP11.73□□□□□ -0.53
CALD1-215ENST00000472096 PRELID3BQ9Y3B1 194 aa11.73□□□□□ -0.53
CALD1-215ENST00000472096 CCL24O00175 119 aa11.72□□□□□ -0.53
CALD1-215ENST00000472096 ZNF182P17025 639 aaPredicted RBP11.72□□□□□ -0.53
CALD1-215ENST00000472096 PRSS3P35030 304 aa11.72□□□□□ -0.53
CALD1-215ENST00000472096 RAB9AP51151 201 aa11.72□□□□□ -0.53
CALD1-215ENST00000472096 FXYD4P59646 89 aa11.72□□□□□ -0.53
CALD1-215ENST00000472096 UBE2KP61086 200 aa11.72□□□□□ -0.53
CALD1-215ENST00000472096 GNB1P62873 340 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms