RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	IGKV1D-13	A0A0B4J2D9	117 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	SMIM31	A0A1B0GVY4	71 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	LINC00473	A8K010	186 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	TNFSF12	O43508	249 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	XRCC3	O43542	346 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	DUS4L	O95620	317 aa	Known RBP	11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	IGKV1-13	P0DP09	117 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	PPIF	P30405	207 aa	Known RBP	11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	DUT	P33316	252 aa	Known RBP	11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	CBX5	P45973	191 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	LGALS7	P47929	136 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	TAS2R20	P59543	309 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	VMA21	Q3ZAQ7	101 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	GPR107	Q5VW38	600 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	HOGA1	Q86XE5	327 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	OR13F1	Q8NGS4	319 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	MRAP	Q8TCY5	172 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	C4orf3	Q8WVX3	66 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	ACOT12	Q8WYK0	555 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	GNB4	Q9HAV0	340 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	TAS2R8	Q9NYW2	309 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	VSIG4	Q9Y279	399 aa		11.56	□□□□□ -0.56
SSR4-208	ENST00000471880	TRIM64C	A6NLI5	447 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	FAM25A	B3EWG3	89 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	FAM25C	B3EWG5	89 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	FAM25G	B3EWG6	89 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	MPPED1	O15442	326 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	SLC22A5	O76082	557 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	HLA-DQB1	P01920	261 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	SMIM18	P0DKX4	95 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	APELA	P0DMC3	54 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	AADAC	P22760	399 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	RAB9A	P51151	201 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	TPPP2	P59282	170 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	HERV-K104	P61576	105 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	PJVK	Q0ZLH3	352 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	TNXA	Q16473	311 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	ZNF562	Q6V9R5	426 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	IDO2	Q6ZQW0	420 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	OR11H1	Q8NG94	326 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	OR5M8	Q8NGP6	311 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	MCRIP2	Q9BUT9	160 aa	Known RBP	11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	MRPS26	Q9BYN8	205 aa	Known RBP	11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	GPR61	Q9BZJ8	451 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	NAA50	Q9GZZ1	169 aa	Known RBP	11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	ZNF580	Q9UK33	172 aa		11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	RBMX2	Q9Y388	322 aa	Known RBP	11.55	□□□□□ -0.56
SSR4-208	ENST00000471880	ACTL6B	O94805	426 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	IGLV1-40	P01703	118 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	IGHV3-11	P01762	117 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	EIF4E	P06730	217 aa	Known RBP	11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	RORC	P51449	518 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	TMEM177	Q53S58	311 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	KPRP	Q5T749	579 aa	Predicted RBP	11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	REC114	Q7Z4M0	266 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	GPR141	Q7Z602	305 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	TMEM17	Q86X19	198 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	SNX29P2	Q8IUI4	249 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	TCTEX1D1	Q8N7M0	179 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	ZNF491	Q8N8L2	437 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	RNF152	Q8N8N0	203 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	OR5T1	Q8NG75	326 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	OR1N2	Q8NGR9	330 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	KCTD12	Q96CX2	325 aa	Known RBP	11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	UBE2E2	Q96LR5	201 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	GPHA2	Q96T91	129 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	P2RX4	Q99571	388 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	SLC5A7	Q9GZV3	580 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	CCL28	Q9NRJ3	127 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	EHF	Q9NZC4	300 aa		11.54	□□□□□ -0.56
SSR4-208	ENST00000471880	ARPC1B	O15143	372 aa	Known RBP	11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	SOX15	O60248	233 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	HPGDS	O60760	199 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	PPY	P01298	95 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	IGLV2-23	P01705	113 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	TRGV3	P03979	118 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	PRSS3	P35030	304 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	RPL30	P62888	115 aa	Known RBP	11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	CDK10	Q15131	360 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	RNASE12	Q5GAN4	147 aa	Known RBP	11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	PYHIN1	Q6K0P9	492 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	MZT2A	Q6P582	158 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	MINDY2	Q8NBR6	621 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	OR5AP2	Q8NGF4	316 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	OR5H2	Q8NGV7	314 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	SNAPC3	Q92966	411 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	HSD17B10	Q99714	261 aa	Known RBP	11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	ALX4	Q9H161	411 aa	Predicted RBP	11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	COA4	Q9NYJ1	87 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	NUBP2	Q9Y5Y2	271 aa		11.53	□□□□□ -0.56
SSR4-208	ENST00000471880	SRRM4	A7MD48	611 aa	Known RBP	11.52	□□□□□ -0.57
SSR4-208	ENST00000471880	PMP2	P02689	132 aa		11.52	□□□□□ -0.57
SSR4-208	ENST00000471880	EGR2	P11161	476 aa	Predicted RBP	11.52	□□□□□ -0.57
SSR4-208	ENST00000471880	ZNF616	Q08AN1	781 aa		11.52	□□□□□ -0.57
SSR4-208	ENST00000471880	AKIRIN2	Q53H80	203 aa		11.52	□□□□□ -0.57
SSR4-208	ENST00000471880	VKORC1L1	Q8N0U8	176 aa		11.52	□□□□□ -0.57
SSR4-208	ENST00000471880	OR4S2	Q8NH73	311 aa		11.52	□□□□□ -0.57
SSR4-208	ENST00000471880	OSR1	Q8TAX0	266 aa	Predicted RBP	11.52	□□□□□ -0.57
SSR4-208	ENST00000471880	DDB2	Q92466	427 aa		11.52	□□□□□ -0.57

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