RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 ARL6IP1Q15041 203 aa16.78■□□□□ 0.28
TTC28-204ENST00000468807 CDNFQ49AH0 187 aa16.78■□□□□ 0.28
TTC28-204ENST00000468807 UBE2UQ5VVX9 321 aa16.78■□□□□ 0.28
TTC28-204ENST00000468807 ACSM6Q6P461 480 aa16.78■□□□□ 0.28
TTC28-204ENST00000468807 SPARTQ8N0X7 666 aa16.78■□□□□ 0.28
TTC28-204ENST00000468807 OR6Q1Q8NGQ2 317 aa16.78■□□□□ 0.28
TTC28-204ENST00000468807 CENPOQ9BU64 300 aa16.78■□□□□ 0.28
TTC28-204ENST00000468807 ST6GALNAC5Q9BVH7 336 aa16.78■□□□□ 0.28
TTC28-204ENST00000468807 ANKRD34BA5PLL1 514 aa16.77■□□□□ 0.28
TTC28-204ENST00000468807 NOTOA8MTQ0 251 aa16.77■□□□□ 0.28
TTC28-204ENST00000468807 CRYGBP07316 175 aa16.77■□□□□ 0.28
TTC28-204ENST00000468807 APELAP0DMC3 54 aa16.77■□□□□ 0.28
TTC28-204ENST00000468807 RRASP10301 218 aa16.77■□□□□ 0.28
TTC28-204ENST00000468807 SSBP2P81877 361 aaPredicted RBP16.77■□□□□ 0.28
TTC28-204ENST00000468807 DEFA5Q01523 94 aa16.77■□□□□ 0.28
TTC28-204ENST00000468807 TAGLNQ01995 201 aaKnown RBP16.77■□□□□ 0.28
TTC28-204ENST00000468807 H1FOOQ8IZA3 346 aaPredicted RBP16.77■□□□□ 0.28
TTC28-204ENST00000468807 RSRP1Q9BUV0 290 aa16.77■□□□□ 0.28
TTC28-204ENST00000468807 Q9H521 79 aa16.77■□□□□ 0.28
TTC28-204ENST00000468807 DAPK2Q9UIK4 370 aa16.77■□□□□ 0.28
TTC28-204ENST00000468807 STUB1Q9UNE7 303 aa16.77■□□□□ 0.28
TTC28-204ENST00000468807 A0A0G2JLM5 398 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 SRRM4A7MD48 611 aaKnown RBP16.76■□□□□ 0.27
TTC28-204ENST00000468807 CRYZL1O95825 349 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 GP9P14770 177 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 DTYMKP23919 212 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 SRSF7Q16629 238 aaKnown RBP eCLIP16.76■□□□□ 0.27
TTC28-204ENST00000468807 VMA21Q3ZAQ7 101 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 TMEM177Q53S58 311 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 IDO2Q6ZQW0 420 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 HAPLN4Q86UW8 402 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 FCGR1BQ92637 280 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 ADTRPQ96IZ2 230 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 COA4Q9NYJ1 87 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 SSR3Q9UNL2 185 aa16.76■□□□□ 0.27
TTC28-204ENST00000468807 H3BUA1 57 aa16.75■□□□□ 0.27
TTC28-204ENST00000468807 DUTP33316 252 aaKnown RBP16.75■□□□□ 0.27
TTC28-204ENST00000468807 HACD4Q5VWC8 232 aa16.75■□□□□ 0.27
TTC28-204ENST00000468807 Q6ZS49 121 aa16.75■□□□□ 0.27
TTC28-204ENST00000468807 OVCH2Q7RTZ1 564 aa16.75■□□□□ 0.27
TTC28-204ENST00000468807 NUDCD2Q8WVJ2 157 aa16.75■□□□□ 0.27
TTC28-204ENST00000468807 DCUN1D5Q9BTE7 237 aa16.75■□□□□ 0.27
TTC28-204ENST00000468807 ELOVL1Q9BW60 279 aa16.75■□□□□ 0.27
TTC28-204ENST00000468807 RANGRFQ9HD47 186 aaPredicted RBP16.75■□□□□ 0.27
TTC28-204ENST00000468807 RRP15Q9Y3B9 282 aaKnown RBP16.75■□□□□ 0.27
TTC28-204ENST00000468807 RYR3Q15413 4870 aa16.75■□□□□ 0.27
TTC28-204ENST00000468807 LINC00473A8K010 186 aa16.74■□□□□ 0.27
TTC28-204ENST00000468807 MPPED1O15442 326 aa16.74■□□□□ 0.27
TTC28-204ENST00000468807 NFYAP23511 347 aaPredicted RBP16.74■□□□□ 0.27
TTC28-204ENST00000468807 FGF9P31371 208 aaPredicted RBP16.74■□□□□ 0.27
TTC28-204ENST00000468807 TNXAQ16473 311 aa16.74■□□□□ 0.27
TTC28-204ENST00000468807 ACOT12Q8WYK0 555 aa16.74■□□□□ 0.27
TTC28-204ENST00000468807 STAB2Q8WWQ8 2551 aa16.74■□□□□ 0.27
TTC28-204ENST00000468807 TMEM235A6NFC5 223 aa16.73■□□□□ 0.27
TTC28-204ENST00000468807 MSGN1A6NI15 193 aa16.73■□□□□ 0.27
TTC28-204ENST00000468807 ZP3P21754 424 aa16.73■□□□□ 0.27
TTC28-204ENST00000468807 GNG2P59768 71 aa16.73■□□□□ 0.27
TTC28-204ENST00000468807 OR2B11Q5JQS5 317 aa16.73■□□□□ 0.27
TTC28-204ENST00000468807 TPRA1Q86W33 373 aa16.73■□□□□ 0.27
TTC28-204ENST00000468807 ZNF645Q8N7E2 425 aa16.73■□□□□ 0.27
TTC28-204ENST00000468807 LGALS14Q8TCE9 139 aa16.73■□□□□ 0.27
TTC28-204ENST00000468807 DDB2Q92466 427 aa16.73■□□□□ 0.27
TTC28-204ENST00000468807 TMEM68Q96MH6 324 aa16.73■□□□□ 0.27
TTC28-204ENST00000468807 FCGR3BO75015 233 aa16.72■□□□□ 0.27
TTC28-204ENST00000468807 TUSC2O75896 110 aa16.72■□□□□ 0.27
TTC28-204ENST00000468807 CTXN2P0C2S0 81 aa16.72■□□□□ 0.27
TTC28-204ENST00000468807 UBE2KP61086 200 aa16.72■□□□□ 0.27
TTC28-204ENST00000468807 MXD1Q05195 221 aa16.72■□□□□ 0.27
TTC28-204ENST00000468807 SFXN4Q6P4A7 337 aa16.72■□□□□ 0.27
TTC28-204ENST00000468807 ANKRD13BQ86YJ7 626 aa16.72■□□□□ 0.27
TTC28-204ENST00000468807 TEX45Q8NA69 505 aa16.72■□□□□ 0.27
TTC28-204ENST00000468807 TINAGL1Q9GZM7 467 aaPredicted RBP16.72■□□□□ 0.27
TTC28-204ENST00000468807 OR51E2Q9H255 320 aa16.72■□□□□ 0.27
TTC28-204ENST00000468807 TRIM64CA6NLI5 447 aa16.71■□□□□ 0.27
TTC28-204ENST00000468807 SCGNO76038 276 aa16.71■□□□□ 0.27
TTC28-204ENST00000468807 ACTL6BO94805 426 aa16.71■□□□□ 0.27
TTC28-204ENST00000468807 AADACP22760 399 aa16.71■□□□□ 0.27
TTC28-204ENST00000468807 PRSS8Q16651 343 aa16.71■□□□□ 0.27
TTC28-204ENST00000468807 KCTD9Q7L273 389 aa16.71■□□□□ 0.27
TTC28-204ENST00000468807 SBSPONQ8IVN8 264 aa16.71■□□□□ 0.27
TTC28-204ENST00000468807 OSR1Q8TAX0 266 aaPredicted RBP16.71■□□□□ 0.27
TTC28-204ENST00000468807 SRSF12Q8WXF0 261 aaKnown RBP16.71■□□□□ 0.27
TTC28-204ENST00000468807 DCSTAMPQ9H295 470 aa16.71■□□□□ 0.27
TTC28-204ENST00000468807 OR2W1Q9Y3N9 320 aa16.71■□□□□ 0.27
TTC28-204ENST00000468807 TNCP24821 2201 aa16.71■□□□□ 0.27
TTC28-204ENST00000468807 LOC100506127A0A0U1RQW1 187 aa16.7■□□□□ 0.26
TTC28-204ENST00000468807 FRMD6-AS1P0C7T7 363 aa16.7■□□□□ 0.26
TTC28-204ENST00000468807 CD36P16671 472 aa16.7■□□□□ 0.26
TTC28-204ENST00000468807 SDC2P34741 201 aa16.7■□□□□ 0.26
TTC28-204ENST00000468807 MRGPRG-AS1Q2M3A8 158 aa16.7■□□□□ 0.26
TTC28-204ENST00000468807 ZNF773Q6PK81 442 aa16.7■□□□□ 0.26
TTC28-204ENST00000468807 YTHDF1Q9BYJ9 559 aaKnown RBP16.7■□□□□ 0.26
TTC28-204ENST00000468807 RHBDL2Q9NX52 303 aa16.7■□□□□ 0.26
TTC28-204ENST00000468807 PEF1Q9UBV8 284 aaKnown RBP16.7■□□□□ 0.26
TTC28-204ENST00000468807 PRELID3BQ9Y3B1 194 aa16.7■□□□□ 0.26
TTC28-204ENST00000468807 DNAH7Q8WXX0 4024 aa16.69■□□□□ 0.26
TTC28-204ENST00000468807 SAA1P0DJI8 122 aaPredicted RBP16.69■□□□□ 0.26
TTC28-204ENST00000468807 SYNJ2BPP57105 145 aa16.69■□□□□ 0.26
TTC28-204ENST00000468807 CNIH2Q6PI25 160 aa16.69■□□□□ 0.26
TTC28-204ENST00000468807 RNF167Q9H6Y7 350 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms