RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 Q6ZRM9 215 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 C1orf122Q6ZSJ8 110 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 TGIF2LYQ8IUE0 185 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 OR4A5Q8NH83 315 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 VSTM2AQ8TAG5 236 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 PINX1Q96BK5 328 aaKnown RBP8.37□□□□□ -1.07
MSH5-213ENST00000468136 ATP5SQ99766 215 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 SPOCK3Q9BQ16 436 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 ZNF251Q9BRH9 671 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 PARP11Q9NR21 331 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 CTSZQ9UBR2 303 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 PRNDQ9UKY0 176 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 AMMECR1Q9Y4X0 333 aaPredicted RBP8.37□□□□□ -1.07
MSH5-213ENST00000468136 DSCAML1Q8TD84 2053 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 ROS1P08922 2347 aa8.37□□□□□ -1.07
MSH5-213ENST00000468136 LAMA5O15230 3695 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 USF3Q68DE3 2245 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 IGSF23A1L1A6 192 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 MFSD2BA6NFX1 497 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 J3QR06 171 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 M0R1W7 72 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 RBMXL2O75526 392 aaKnown RBP8.36□□□□□ -1.07
MSH5-213ENST00000468136 LIPFP07098 398 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 IGHV1-8P0DP01 117 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 UQCRFS1P47985 274 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 PAX9P55771 341 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 BRWD1-AS2P59051 145 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 ERVFRD-1P60508 538 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 TLE4Q04727 773 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 WDR25Q64LD2 544 aaPredicted RBP8.36□□□□□ -1.07
MSH5-213ENST00000468136 LYPD2Q6UXB3 125 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 TMEM14EPQ6UXP3 125 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 ZNF841Q6ZN19 808 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 PDPNQ86YL7 162 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 ODF3L1Q8IXM7 274 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 LY6G5BQ8NDX9 201 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 BEND2Q8NDZ0 799 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 OR5AN1Q8NGI8 311 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 OR10X1Q8NGY0 326 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 TMED6Q8WW62 240 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 MARC2Q969Z3 335 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 CITED4Q96RK1 184 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 GGACTQ9BVM4 153 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 MAGT1Q9H0U3 335 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 TMEM133Q9H2Q1 129 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 PATZ1Q9HBE1 687 aaKnown RBP8.36□□□□□ -1.07
MSH5-213ENST00000468136 ZNF257Q9Y2Q1 563 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 PKDREJQ9NTG1 2253 aa8.36□□□□□ -1.07
MSH5-213ENST00000468136 ZNF705EA8MWA4 302 aaPredicted RBP8.35□□□□□ -1.07
MSH5-213ENST00000468136 SLC31A2O15432 143 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 PPIHO43447 177 aaKnown RBP8.35□□□□□ -1.07
MSH5-213ENST00000468136 TSPAN9O75954 239 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 SOD3P08294 240 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 FAM157CP0CG43 387 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 GPR6P46095 362 aaPredicted RBP8.35□□□□□ -1.07
MSH5-213ENST00000468136 F2RL1P55085 397 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 NHLH2Q02577 135 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 AANATQ16613 207 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 RPL39P5Q59GN2 51 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 KIR3DL3Q8N743 410 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 LFNGQ8NES3 379 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 OR5C1Q8NGR4 320 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 SCGB1C1Q8TD33 95 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 DTD1Q8TEA8 209 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 RNF5Q99942 180 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 PSMG3Q9BT73 122 aaPredicted RBP8.35□□□□□ -1.07
MSH5-213ENST00000468136 HIPK2Q9H2X6 1198 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 RBKSQ9H477 322 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 MMP26Q9NRE1 261 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 SLC35D1Q9NTN3 355 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 BET1LQ9NYM9 111 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 FOXA2Q9Y261 457 aaPredicted RBP8.35□□□□□ -1.07
MSH5-213ENST00000468136 ATRXP46100 2492 aa8.35□□□□□ -1.07
MSH5-213ENST00000468136 ARID1AO14497 2285 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 HIVEP3Q5T1R4 2406 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 SPENQ96T58 3664 aaKnown RBP8.34□□□□□ -1.07
MSH5-213ENST00000468136 PPIAL4CA0A0B4J2A2 164 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 BTBD17A6NE02 478 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 C15orf61A6NNL5 157 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 CEBPZOSA8MTT3 80 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 A8MXK9 166 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 KCNAB3O43448 404 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 TMEM50AO95807 157 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 CT45A6P0DMU7 189 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 CT45A5P0DMU8 189 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 CT45A7P0DMV0 189 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 PPIAL4GP0DN37 164 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 CCL3L1P16619 93 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 LGALS7P47929 136 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 GNG10P50151 68 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 DYNLT3P51808 116 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 RAB2AP61019 212 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 GNB2P62879 340 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 SERF2P84101 59 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 TMEM177Q53S58 311 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 OR2B11Q5JQS5 317 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 MRPL41Q8IXM3 137 aaKnown RBP8.34□□□□□ -1.07
MSH5-213ENST00000468136 ABHD12Q8N2K0 398 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 ZNF383Q8NA42 475 aa8.34□□□□□ -1.07
MSH5-213ENST00000468136 OR10P1Q8NGE3 313 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms