RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 ADAM30Q9UKF2 790 aa13.15□□□□□ -0.3
TRIM56-203ENST00000467847 MSGN1A6NI15 193 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 SRRM4A7MD48 611 aaKnown RBP13.14□□□□□ -0.31
TRIM56-203ENST00000467847 CSN3P07498 182 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 FCGR3AP08637 254 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 GSTT2P0CG29 244 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 GSTT2BP0CG30 244 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 RANBP1P43487 201 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 PLA2G7Q13093 441 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 TMEM177Q53S58 311 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 Q8N402 240 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 RAB3CQ96E17 227 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 C5orf30Q96GV9 206 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 CABLES2Q9BTV7 478 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 KCNK7Q9Y2U2 307 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 RBM7Q9Y580 266 aaKnown RBP13.14□□□□□ -0.31
TRIM56-203ENST00000467847 V9GY05 133 aa13.14□□□□□ -0.31
TRIM56-203ENST00000467847 TRBV6-7A0A0A0MS04 114 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 TMEM272A0A1B0GTI8 110 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 OR2A4O95047 310 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 IFNA6P05013 189 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 RRASP10301 218 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 VMA21Q3ZAQ7 101 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 HES5Q5TA89 166 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 ADAMTSL5Q6ZMM2 481 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 GINS4Q9BRT9 223 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 THAP7Q9BT49 309 aaPredicted RBP13.13□□□□□ -0.31
TRIM56-203ENST00000467847 SIGLEC8Q9NYZ4 499 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 NKX1-2Q9UD57 310 aaPredicted RBP13.13□□□□□ -0.31
TRIM56-203ENST00000467847 RAB22AQ9UL26 194 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 TPRKBQ9Y3C4 175 aa13.13□□□□□ -0.31
TRIM56-203ENST00000467847 A0A0B4J203 849 aa13.12□□□□□ -0.31
TRIM56-203ENST00000467847 IZUMO1RA6ND01 250 aa13.12□□□□□ -0.31
TRIM56-203ENST00000467847 MPPED1O15442 326 aa13.12□□□□□ -0.31
TRIM56-203ENST00000467847 RBMXL2O75526 392 aaKnown RBP13.12□□□□□ -0.31
TRIM56-203ENST00000467847 DIRAS3O95661 229 aa13.12□□□□□ -0.31
TRIM56-203ENST00000467847 PSMD7P51665 324 aa13.12□□□□□ -0.31
TRIM56-203ENST00000467847 UBE2KP61086 200 aa13.12□□□□□ -0.31
TRIM56-203ENST00000467847 FABP5Q01469 135 aa13.12□□□□□ -0.31
TRIM56-203ENST00000467847 MLLT11Q13015 90 aaPredicted RBP13.12□□□□□ -0.31
TRIM56-203ENST00000467847 TNXAQ16473 311 aa13.12□□□□□ -0.31
TRIM56-203ENST00000467847 MRGPRG-AS1Q2M3A8 158 aa13.12□□□□□ -0.31
TRIM56-203ENST00000467847 ADAD2Q8NCV1 583 aaKnown RBP13.12□□□□□ -0.31
TRIM56-203ENST00000467847 MAFIPQ8WZ33 124 aa13.12□□□□□ -0.31
TRIM56-203ENST00000467847 SNAPC3Q92966 411 aa13.12□□□□□ -0.31
TRIM56-203ENST00000467847 ZNF230Q9UIE0 474 aaPredicted RBP13.12□□□□□ -0.31
TRIM56-203ENST00000467847 A0A075B6Q4 140 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 RGS10O43665 173 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 CRYZL1O95825 349 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 OR9G9P0C7N8 305 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 GNB3P16520 340 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 GADD45AP24522 165 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 PRSS8Q16651 343 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 IDO2Q6ZQW0 420 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 TEX45Q8NA69 505 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 SRSF12Q8WXF0 261 aaKnown RBP13.11□□□□□ -0.31
TRIM56-203ENST00000467847 ACOT12Q8WYK0 555 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 ADTRPQ96IZ2 230 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 CCDC90BQ9GZT6 254 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 DUSP21Q9H596 190 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 PEMTQ9UBM1 199 aa13.11□□□□□ -0.31
TRIM56-203ENST00000467847 RHOGP84095 191 aa13.1□□□□□ -0.31
TRIM56-203ENST00000467847 OR10R2Q8NGX6 335 aa13.1□□□□□ -0.31
TRIM56-203ENST00000467847 DDB2Q92466 427 aa13.1□□□□□ -0.31
TRIM56-203ENST00000467847 ACOT13Q9NPJ3 140 aa13.1□□□□□ -0.31
TRIM56-203ENST00000467847 AKIP1Q9NQ31 210 aa13.1□□□□□ -0.31
TRIM56-203ENST00000467847 SHISA3A0PJX4 238 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 FAM223BA6NKX1 122 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 LINC00473A8K010 186 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 BMPR1BO00238 502 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 MFNGO00587 321 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 AIREO43918 545 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 PRH1P02810 166 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 HIST1H1DP16402 221 aaKnown RBP13.09□□□□□ -0.31
TRIM56-203ENST00000467847 DUTP33316 252 aaKnown RBP13.09□□□□□ -0.31
TRIM56-203ENST00000467847 TALDO1P37837 337 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 ATP5G2Q06055 141 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 EXOSC2Q13868 293 aaKnown RBP13.09□□□□□ -0.31
TRIM56-203ENST00000467847 FAM223AQ8IWN6 122 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 OR2K2Q8NGT1 345 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 MGLLQ99685 303 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 PLEKHA3Q9HB20 300 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 RETNQ9HD89 108 aa13.09□□□□□ -0.31
TRIM56-203ENST00000467847 ERICH4A6NGS2 130 aa13.08□□□□□ -0.32
TRIM56-203ENST00000467847 PDCD5O14737 125 aa13.08□□□□□ -0.32
TRIM56-203ENST00000467847 TUSC2O75896 110 aa13.08□□□□□ -0.32
TRIM56-203ENST00000467847 ACTL6BO94805 426 aa13.08□□□□□ -0.32
TRIM56-203ENST00000467847 MAP2K4P45985 399 aa13.08□□□□□ -0.32
TRIM56-203ENST00000467847 MECP2P51608 486 aaKnown RBP13.08□□□□□ -0.32
TRIM56-203ENST00000467847 AQP4P55087 323 aa13.08□□□□□ -0.32
TRIM56-203ENST00000467847 OR10A3P58181 314 aa13.08□□□□□ -0.32
TRIM56-203ENST00000467847 CD81P60033 236 aa13.08□□□□□ -0.32
TRIM56-203ENST00000467847 H1FOOQ8IZA3 346 aaPredicted RBP13.08□□□□□ -0.32
TRIM56-203ENST00000467847 OSR1Q8TAX0 266 aaPredicted RBP13.08□□□□□ -0.32
TRIM56-203ENST00000467847 SPIN2AQ99865 258 aa13.08□□□□□ -0.32
TRIM56-203ENST00000467847 SPIN2BQ9BPZ2 258 aa13.08□□□□□ -0.32
TRIM56-203ENST00000467847 CENPOQ9BU64 300 aa13.08□□□□□ -0.32
TRIM56-203ENST00000467847 ZNF430Q9H8G1 570 aaPredicted RBP13.08□□□□□ -0.32
TRIM56-203ENST00000467847 CEPT1Q9Y6K0 416 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms