RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 WRBO00258 174 aa15.36■□□□□ 0.05
CAPN3-209ENST00000466222 IGKV1-13P0DP09 117 aa15.36■□□□□ 0.05
CAPN3-209ENST00000466222 NDUFB7P17568 137 aa15.36■□□□□ 0.05
CAPN3-209ENST00000466222 AKR1D1P51857 326 aa15.36■□□□□ 0.05
CAPN3-209ENST00000466222 MOB1BQ7L9L4 216 aa15.36■□□□□ 0.05
CAPN3-209ENST00000466222 HIST1H2BAQ96A08 127 aa15.36■□□□□ 0.05
CAPN3-209ENST00000466222 CLCC1Q96S66 551 aa15.36■□□□□ 0.05
CAPN3-209ENST00000466222 ODAMA1E959 279 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 C12orf77C9JDV5 145 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 DVL1O14640 695 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 HSD17B6O14756 317 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 PGLYRP1O75594 196 aaPredicted RBP15.35■□□□□ 0.05
CAPN3-209ENST00000466222 FHITP49789 147 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 CLINT1Q14677 625 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 ZNF787Q6DD87 383 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 H1FOOQ8IZA3 346 aaPredicted RBP15.35■□□□□ 0.05
CAPN3-209ENST00000466222 OR1L1Q8NH94 360 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 CHODLQ9H9P2 273 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 OR1A1Q9P1Q5 309 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 SLC25A10Q9UBX3 287 aaPredicted RBP15.35■□□□□ 0.05
CAPN3-209ENST00000466222 OR2W1Q9Y3N9 320 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 A0A1B0GU03 582 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 NKX6-3A6NJ46 265 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 F2RP25116 425 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 MRPS11P82912 194 aaKnown RBP15.35■□□□□ 0.05
CAPN3-209ENST00000466222 COA4Q9NYJ1 87 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 KIAA1456Q9P272 454 aa15.35■□□□□ 0.05
CAPN3-209ENST00000466222 M0R036 132 aa15.34■□□□□ 0.05
CAPN3-209ENST00000466222 DFFBO76075 338 aa15.34■□□□□ 0.05
CAPN3-209ENST00000466222 SNRNP70P08621 437 aaKnown RBP15.34■□□□□ 0.05
CAPN3-209ENST00000466222 OMGP23515 440 aa15.34■□□□□ 0.05
CAPN3-209ENST00000466222 RPL35P42766 123 aaKnown RBP15.34■□□□□ 0.05
CAPN3-209ENST00000466222 ERVFRD-1P60508 538 aa15.34■□□□□ 0.05
CAPN3-209ENST00000466222 CXorf66Q5JRM2 361 aaPredicted RBP15.34■□□□□ 0.05
CAPN3-209ENST00000466222 TCF23Q7RTU1 214 aa15.34■□□□□ 0.05
CAPN3-209ENST00000466222 OR5C1Q8NGR4 320 aa15.34■□□□□ 0.05
CAPN3-209ENST00000466222 OR10J5Q8NHC4 309 aa15.34■□□□□ 0.05
CAPN3-209ENST00000466222 PPP1R35Q8TAP8 253 aa15.34■□□□□ 0.05
CAPN3-209ENST00000466222 SFT2D1Q8WV19 159 aa15.34■□□□□ 0.05
CAPN3-209ENST00000466222 RAI1Q7Z5J4 1906 aaPredicted RBP15.34■□□□□ 0.05
CAPN3-209ENST00000466222 PTPN13Q12923 2485 aa15.33■□□□□ 0.05
CAPN3-209ENST00000466222 PPP1CCP36873 323 aaKnown RBP15.33■□□□□ 0.05
CAPN3-209ENST00000466222 RAB2AP61019 212 aa15.33■□□□□ 0.05
CAPN3-209ENST00000466222 HABP2Q14520 560 aaPredicted RBP15.33■□□□□ 0.05
CAPN3-209ENST00000466222 ATP5SQ99766 215 aa15.33■□□□□ 0.05
CAPN3-209ENST00000466222 ABCA12Q86UK0 2595 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 HBZP02008 142 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 HBE1P02100 147 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 DYNLT3P51808 116 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 RPL23AP62750 156 aaKnown RBP15.33■□□□□ 0.04
CAPN3-209ENST00000466222 PAX5Q02548 391 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 LTC4SQ16873 150 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 UTF1Q5T230 341 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 ZNF841Q6ZN19 808 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 LSM10Q969L4 123 aaKnown RBP15.33■□□□□ 0.04
CAPN3-209ENST00000466222 MALSU1Q96EH3 234 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 RAB40CQ96S21 281 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 FAM234AQ9H0X4 552 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 KAAG1Q9UBP8 84 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 FBXO7Q9Y3I1 522 aa15.33■□□□□ 0.04
CAPN3-209ENST00000466222 RBFOX3A6NFN3 312 aa15.32■□□□□ 0.04
CAPN3-209ENST00000466222 MAS1LP35410 378 aa15.32■□□□□ 0.04
CAPN3-209ENST00000466222 AKIRIN2Q53H80 203 aa15.32■□□□□ 0.04
CAPN3-209ENST00000466222 STX12Q86Y82 276 aa15.32■□□□□ 0.04
CAPN3-209ENST00000466222 H1FXQ92522 213 aaKnown RBP15.32■□□□□ 0.04
CAPN3-209ENST00000466222 RAB1CQ92928 201 aa15.32■□□□□ 0.04
CAPN3-209ENST00000466222 RBMXL1Q96E39 390 aaKnown RBP15.32■□□□□ 0.04
CAPN3-209ENST00000466222 PERPQ96FX8 193 aa15.32■□□□□ 0.04
CAPN3-209ENST00000466222 APCP25054 2843 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 IGHV3-43A0A0B4J1X8 118 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 C15orf65H3BRN8 121 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 NDUFB3O43676 98 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 IGHV3-43DP0DP04 118 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 S100A12P80511 92 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 SOHLH1Q5JUK2 328 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 SPSB3Q6PJ21 355 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 OR52L2PQ8NGH6 319 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 OR10V1Q8NGI7 309 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 MAGT1Q9H0U3 335 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 CHST1O43916 411 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 IGHV3-7P01780 117 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 SERPINE2P07093 398 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 GPR6P46095 362 aaPredicted RBP15.31■□□□□ 0.04
CAPN3-209ENST00000466222 TAS2R30P59541 319 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 AKR1C8PQ5T2L2 129 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 ETV3LQ6ZN32 361 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 ODF3L1Q8IXM7 274 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 CD300LFQ8TDQ1 290 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 C2CD4CQ8TF44 421 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 TIMD4Q96H15 378 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 C12orf57Q99622 126 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 BPESC1Q9GZL8 116 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 KCNIP1Q9NZI2 227 aa15.31■□□□□ 0.04
CAPN3-209ENST00000466222 DOPEY2Q9Y3R5 2298 aa15.3■□□□□ 0.04
CAPN3-209ENST00000466222 DSCAMO60469 2012 aa15.3■□□□□ 0.04
CAPN3-209ENST00000466222 S100A8P05109 93 aa15.3■□□□□ 0.04
CAPN3-209ENST00000466222 SULT1A1P50225 295 aa15.3■□□□□ 0.04
CAPN3-209ENST00000466222 ATP5J2P56134 94 aa15.3■□□□□ 0.04
CAPN3-209ENST00000466222 LRRC10Q5BKY1 277 aa15.3■□□□□ 0.04
CAPN3-209ENST00000466222 MMP23AO75900 390 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms