RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 HARBI1Q96MB7 349 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 FAM103A1Q9BTL3 118 aaKnown RBP9.18□□□□□ -0.94
CUX1-207ENST00000465461 PARP11Q9NR21 331 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 FBXO7Q9Y3I1 522 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 WSB1Q9Y6I7 421 aa9.18□□□□□ -0.94
CUX1-207ENST00000465461 TET2Q6N021 2002 aaPredicted RBP9.17□□□□□ -0.94
CUX1-207ENST00000465461 FABP12A6NFH5 140 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 GABARAPH6UMI1 98 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 ZNF701M0R085 212 aaPredicted RBP9.17□□□□□ -0.94
CUX1-207ENST00000465461 AP4M1O00189 453 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 SLC22A5O76082 557 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 CA2P00918 260 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 HLA-DRB1P01911 266 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 CX3CL1P78423 397 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 TAGLNQ01995 201 aaKnown RBP9.17□□□□□ -0.94
CUX1-207ENST00000465461 PJVKQ0ZLH3 352 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 RTL8BQ17RB0 113 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 TMEM177Q53S58 311 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 C18orf65Q6ZTR6 163 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 VKORC1L1Q8N0U8 176 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 SGMS2Q8NHU3 365 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 DGCR14Q96DF8 476 aaKnown RBP9.17□□□□□ -0.94
CUX1-207ENST00000465461 ADTRPQ96IZ2 230 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 TSNAXQ99598 290 aaKnown RBP9.17□□□□□ -0.94
CUX1-207ENST00000465461 RNF5Q99942 180 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 SOSTQ9BQB4 213 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 OR51J1Q9H342 316 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 A3GALT2U3KPV4 340 aa9.17□□□□□ -0.94
CUX1-207ENST00000465461 TCRBV4S1A1TA0A5B7 111 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 ADARB2-AS1A8MUL3 147 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 ARPC1BO15143 372 aaKnown RBP9.16□□□□□ -0.94
CUX1-207ENST00000465461 KCNAB3O43448 404 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 RAMP3O60896 148 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 CRYGBP07316 175 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 RRASP10301 218 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 EGR2P11161 476 aaPredicted RBP9.16□□□□□ -0.94
CUX1-207ENST00000465461 GNB1P62873 340 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 CD83Q01151 205 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 CBX3Q13185 183 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 MRGPRG-AS1Q2M3A8 158 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 PHLDA2Q53GA4 152 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 KHDC1LQ5JSQ8 128 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 VAX1Q5SQQ9 334 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 TMEM229BQ8NBD8 167 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 OR51H1Q8NH63 302 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 FAM110DQ8TAY7 271 aaPredicted RBP9.16□□□□□ -0.94
CUX1-207ENST00000465461 ABHD5Q8WTS1 349 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 CHPT1Q8WUD6 406 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 C15orf40Q8WUR7 153 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 SMIM4Q8WVI0 70 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 HSD17B10Q99714 261 aaKnown RBP9.16□□□□□ -0.94
CUX1-207ENST00000465461 MMP27Q9H306 513 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 PRELID3BQ9Y3B1 194 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 PLXNB1O43157 2135 aa9.16□□□□□ -0.94
CUX1-207ENST00000465461 M0QZ24 198 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 CTDSPLO15194 276 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 PGLYRP1O75594 196 aaPredicted RBP9.15□□□□□ -0.94
CUX1-207ENST00000465461 TPPPO94811 219 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 RAB3DO95716 219 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 RLN1P04808 185 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 IFNA6P05013 189 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 CSF1P09603 554 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 LGALS7P47929 136 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 SSBP2P81877 361 aaPredicted RBP9.15□□□□□ -0.94
CUX1-207ENST00000465461 ECSCRQ19T08 205 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 RNASE10Q5GAN6 216 aaKnown RBP9.15□□□□□ -0.94
CUX1-207ENST00000465461 AADACL3Q5VUY0 350 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 STEAP1BQ6NZ63 245 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 ZNF66Q6ZN08 573 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 SSX9Q7RTT3 188 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 ZBTB34Q8NCN2 500 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 OR4X2Q8NGF9 303 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 CASTOR1Q8WTX7 329 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 V9GYH0 126 aa9.15□□□□□ -0.94
CUX1-207ENST00000465461 TRAV41A0A0B4J266 112 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 SPDEFO95238 335 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 CD74P04233 296 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 IGF1P05019 195 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 RPLP1P05386 114 aaKnown RBP9.14□□□□□ -0.95
CUX1-207ENST00000465461 ZNF735P0CB33 412 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 SAA1P0DJI8 122 aaPredicted RBP9.14□□□□□ -0.95
CUX1-207ENST00000465461 RPA2P15927 270 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 PI3P19957 117 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 VDAC1P21796 283 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 S100A5P33763 92 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 PPP5CP53041 499 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 TAS2R19P59542 299 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 SLC35B1P78383 322 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 MRPS10P82664 201 aaKnown RBP9.14□□□□□ -0.95
CUX1-207ENST00000465461 CFHR3Q02985 330 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 FXYD3Q14802 87 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 ZNF79Q15937 498 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 VMA21Q3ZAQ7 101 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 SCGB2B2Q4G0G5 96 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 ACTBL2Q562R1 376 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 PYDC2Q56P42 97 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 PRR31Q5SQ13 230 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 PPP1R27Q86WC6 154 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 NDUFA11Q86Y39 141 aa9.14□□□□□ -0.95
CUX1-207ENST00000465461 SPAG16Q8N0X2 631 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms