RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 LGALS7P47929 136 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 SCAND1P57086 179 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 KRTAP10-11P60412 298 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 VBP1P61758 197 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 NCS1P62166 190 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 ZNF562Q6V9R5 426 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 ZNF491Q8N8L2 437 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 OR5T1Q8NG75 326 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 OR5M8Q8NGP6 311 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 OR1N2Q8NGR9 330 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 ADTRPQ96IZ2 230 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 MCRIP2Q9BUT9 160 aaKnown RBP9.5□□□□□ -0.89
XRN1-204ENST00000465074 FUNDC2Q9BWH2 189 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 GPR61Q9BZJ8 451 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 ALX4Q9H161 411 aaPredicted RBP9.5□□□□□ -0.89
XRN1-204ENST00000465074 AUNIPQ9H7T9 357 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 IFT46Q9NQC8 304 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 ZNF580Q9UK33 172 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 NUBP2Q9Y5Y2 271 aa9.5□□□□□ -0.89
XRN1-204ENST00000465074 IGKV1D-13A0A0B4J2D9 117 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 SOX15O60248 233 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 FCGR3BO75015 233 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 IGHV3-11P01762 117 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 IGKV1-13P0DP09 117 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 RRASP10301 218 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 FCGR2CP31995 323 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 TPPP2P59282 170 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 FXYD4P59646 89 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 TAGLNQ01995 201 aaKnown RBP9.49□□□□□ -0.89
XRN1-204ENST00000465074 UBE2NLQ5JXB2 153 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 IDO2Q6ZQW0 420 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 KCTD9Q7L273 389 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 ZNF645Q8N7E2 425 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 MINDY2Q8NBR6 621 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 SECTM1Q8WVN6 248 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 TCTEX1D2Q8WW35 142 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 ACOT12Q8WYK0 555 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 UBE2E2Q96LR5 201 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 GPHA2Q96T91 129 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 PHB2Q99623 299 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 TAS2R8Q9NYW2 309 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 COMMD3Q9UBI1 195 aa9.49□□□□□ -0.89
XRN1-204ENST00000465074 A0A0A6YYH2 397 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 A6NJ64 397 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 SRRM4A7MD48 611 aaKnown RBP9.48□□□□□ -0.89
XRN1-204ENST00000465074 SEC14L6B5MCN3 397 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 ARPC1BO15143 372 aaKnown RBP9.48□□□□□ -0.89
XRN1-204ENST00000465074 TNFSF12O43508 249 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 XRCC3O43542 346 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 IGLV2-23P01705 113 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 HLA-DQB1P01920 261 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 TRGV3P03979 118 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 AADACP22760 399 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 RPL30P62888 115 aaKnown RBP9.48□□□□□ -0.89
XRN1-204ENST00000465074 ZNF616Q08AN1 781 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 TNXAQ16473 311 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 VMA21Q3ZAQ7 101 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 AKIRIN2Q53H80 203 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 TMEM177Q53S58 311 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 TMEM69Q5SWH9 247 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 HOGA1Q86XE5 327 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 TCTEX1D1Q8N7M0 179 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 MRPS7Q9Y2R9 242 aaKnown RBP9.48□□□□□ -0.89
XRN1-204ENST00000465074 RBMX2Q9Y388 322 aaKnown RBP9.48□□□□□ -0.89
XRN1-204ENST00000465074 PRELID3BQ9Y3B1 194 aa9.48□□□□□ -0.89
XRN1-204ENST00000465074 WI2-2373I1.2A0A1W2PRP0 233 aa9.47□□□□□ -0.89
XRN1-204ENST00000465074 LCE2BO14633 110 aa9.47□□□□□ -0.89
XRN1-204ENST00000465074 MPPED1O15442 326 aa9.47□□□□□ -0.89
XRN1-204ENST00000465074 SLC22A5O76082 557 aa9.47□□□□□ -0.89
XRN1-204ENST00000465074 KIAA0141Q14154 515 aaPredicted RBP9.47□□□□□ -0.89
XRN1-204ENST00000465074 C19orf54Q5BKX5 351 aa9.47□□□□□ -0.89
XRN1-204ENST00000465074 VKORC1L1Q8N0U8 176 aa9.47□□□□□ -0.89
XRN1-204ENST00000465074 DDB2Q92466 427 aa9.47□□□□□ -0.89
XRN1-204ENST00000465074 SLC25A46Q96AG3 418 aa9.47□□□□□ -0.89
XRN1-204ENST00000465074 SLC5A7Q9GZV3 580 aa9.47□□□□□ -0.89
XRN1-204ENST00000465074 CCL28Q9NRJ3 127 aa9.47□□□□□ -0.89
XRN1-204ENST00000465074 COA4Q9NYJ1 87 aa9.47□□□□□ -0.89
XRN1-204ENST00000465074 C13orf42A0A1B0GVH6 325 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 SMIM31A0A1B0GVY4 71 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 ANKRD34BA5PLL1 514 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 MSGN1A6NI15 193 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 I3L521 148 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 K7EIL1 84 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 TMEM127O75204 238 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 ACTL6BO94805 426 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 PMP2P02689 132 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 EIF4EP06730 217 aaKnown RBP9.46□□□□□ -0.9
XRN1-204ENST00000465074 CRYGBP07316 175 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 OR8U8P0C7N1 319 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 CBX5P45973 191 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 CRIP2P52943 208 aaPredicted RBP9.46□□□□□ -0.9
XRN1-204ENST00000465074 SLURP1P55000 103 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 TAS2R20P59543 309 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 DEFA5Q01523 94 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 C9orf66Q5T8R8 295 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 GPR107Q5VW38 600 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 PYHIN1Q6K0P9 492 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 TMEM17Q86X19 198 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 OR13F1Q8NGS4 319 aa9.46□□□□□ -0.9
XRN1-204ENST00000465074 OSR1Q8TAX0 266 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms