RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 C3orf80F5H4A9 247 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 NDUFA2O43678 99 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 SCAF4O95104 1147 aaKnown RBP8.21□□□□□ -1.1
PTPRD-207ENST00000463477 HBZP02008 142 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 ADH4P08319 380 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 FOSL1P15407 271 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 EPHA1P21709 976 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 PPP1CCP36873 323 aaKnown RBP8.21□□□□□ -1.1
PTPRD-207ENST00000463477 RAB2AP61019 212 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 SERF2P84101 59 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 RHEBQ15382 184 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 AKR1C8PQ5T2L2 129 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 ZNF826PQ6ZT77 177 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 OR1L1Q8NH94 360 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 PSENENQ9NZ42 101 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 HSPB7Q9UBY9 170 aa8.21□□□□□ -1.1
PTPRD-207ENST00000463477 RBFOX3A6NFN3 312 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 A6NLC8 198 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 COLCA2A8K830 154 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 WNT9BO14905 357 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 LY86O95711 162 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 IGHV3-13P01766 116 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 PMS2P11Q13670 270 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 RNF212Q495C1 297 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 ZNF506Q5JVG8 444 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 AVPI1Q5T686 147 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 PRAMEF6Q5VXH4 476 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 VHLLQ6RSH7 139 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 FGFRL1Q8N441 504 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 PRR18Q8N4B5 295 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 ZNF525Q8N782 197 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 OR10G4Q8NGN3 311 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 HSD17B10Q99714 261 aaKnown RBP8.2□□□□□ -1.1
PTPRD-207ENST00000463477 TIMM9Q9Y5J7 89 aa8.2□□□□□ -1.1
PTPRD-207ENST00000463477 MEX3AA1L020 520 aaKnown RBP8.19□□□□□ -1.1
PTPRD-207ENST00000463477 RAB29O14966 203 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 NDUFS7O75251 213 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 ZNF737O75373 536 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 IGHV4-39P01824 125 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 HSPB1P04792 205 aaKnown RBP8.19□□□□□ -1.1
PTPRD-207ENST00000463477 NFYBP25208 207 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 CEBPDP49716 269 aaPredicted RBP8.19□□□□□ -1.1
PTPRD-207ENST00000463477 RPS23P62266 143 aaKnown RBP8.19□□□□□ -1.1
PTPRD-207ENST00000463477 COL10A1Q03692 680 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 TNFRSF9Q07011 255 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 AESQ08117 197 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 ATP6V1FQ16864 119 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 LRRC75BQ2VPJ9 315 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 KHDC3LQ587J8 217 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 AWAT1Q58HT5 328 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 KRBOX4Q5JUW0 171 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 TMEM14EPQ6UXP3 125 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 CENPVQ7Z7K6 275 aaPredicted RBP8.19□□□□□ -1.1
PTPRD-207ENST00000463477 TMEM217Q8N7C4 229 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 PPP1R35Q8TAP8 253 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 MBD3L1Q8WWY6 194 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 EDARADDQ8WWZ3 215 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 Q96MF0 132 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 MRPL37Q9BZE1 423 aaKnown RBP8.19□□□□□ -1.1
PTPRD-207ENST00000463477 OR2D2Q9H210 308 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 MLXQ9UH92 298 aa8.19□□□□□ -1.1
PTPRD-207ENST00000463477 IGLV3-9A0A075B6K5 115 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 C7orf77A4D0Y5 90 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 FAM90A9PA6NNJ1 464 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 C15orf65H3BRN8 121 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 ITGB1BP1O14713 200 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 SPINT2O43291 252 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 NDUFS6O75380 124 aaKnown RBP8.18□□□□□ -1.1
PTPRD-207ENST00000463477 TSPAN9O75954 239 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 GZMHP20718 246 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 MAS1LP35410 378 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 GATA4P43694 442 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 GABRA2P47869 451 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 PPOXP50336 477 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 EFNA4P52798 201 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 UBE2KP61086 200 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 MSMPQ1L6U9 139 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 CLEC12BQ2HXU8 276 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 AARDQ4LEZ3 155 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 SOHLH1Q5JUK2 328 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 OR52L2PQ8NGH6 319 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 SCGB1C1Q8TD33 95 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 CD300LFQ8TDQ1 290 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 LRRC29Q8WV35 223 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 PINX1Q96BK5 328 aaKnown RBP8.18□□□□□ -1.1
PTPRD-207ENST00000463477 C5orf30Q96GV9 206 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 SNX22Q96L94 193 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 MSL2Q9HCI7 577 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 RAB9BQ9NP90 201 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-207ENST00000463477 JPT1Q9UK76 154 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 CSPG4Q6UVK1 2322 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 LRRC30A6NM36 301 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 MGST3O14880 152 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 MT-ND4LP03901 98 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 SRP19P09132 144 aaKnown RBP8.18□□□□□ -1.1
PTPRD-207ENST00000463477 ZNF16P17020 682 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-207ENST00000463477 PRDX2P32119 198 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 RAB13P51153 203 aa8.18□□□□□ -1.1
PTPRD-207ENST00000463477 RUNX1Q01196 453 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms