RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 OR51H1Q8NH63 302 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 TERB2Q8NHR7 220 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 SOSTQ9BQB4 213 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 TINAGL1Q9GZM7 467 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-206ENST00000462613 SRRQ9GZT4 340 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 CCL28Q9NRJ3 127 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 COPZ2Q9P299 210 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 MMP24Q9Y5R2 645 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 V9GYH0 126 aa5.1□□□□□ -1.59
SF3B1-206ENST00000462613 NF1P21359 2839 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 ATRQ13535 2644 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 HAX1O00165 279 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 AP4M1O00189 453 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 RRHO14718 337 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 RBFOX2O43251 390 aaKnown RBP eCLIP5.09□□□□□ -1.59
SF3B1-206ENST00000462613 TNFSF12O43508 249 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 B3GALNT1O75752 331 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 ATG12O94817 140 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 HPRT1P00492 218 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 RLN1P04808 185 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 MDKP21741 143 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-206ENST00000462613 CD40LGP29965 261 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 TMEM267Q0VDI3 215 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF846Q147U1 533 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF79Q15937 498 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 C5orf64Q2M2E5 130 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 PHLDA2Q53GA4 152 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 AWAT1Q58HT5 328 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 OR2B11Q5JQS5 317 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF660Q6AZW8 331 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-206ENST00000462613 LIN54Q6MZP7 749 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 CCBE1Q6UXH8 406 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-206ENST00000462613 IDO2Q6ZQW0 420 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 ZNF818PQ6ZRF7 136 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 CENPVQ7Z7K6 275 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-206ENST00000462613 SPAG16Q8N0X2 631 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 Q8N6K4 173 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 DMBX1Q8NFW5 382 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 NPBQ8NG41 125 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 ABHD5Q8WTS1 349 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 C7orf50Q9BRJ6 194 aaKnown RBP5.09□□□□□ -1.59
SF3B1-206ENST00000462613 CCDC32Q9BV29 185 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 C16orf95Q9H693 158 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 SLC2A9Q9NRM0 540 aa5.09□□□□□ -1.59
SF3B1-206ENST00000462613 FAM212BQ9NTI7 297 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-206ENST00000462613 METTL1Q9UBP6 276 aaKnown RBP5.09□□□□□ -1.59
SF3B1-206ENST00000462613 TNCP24821 2201 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 TEX13DA0A0J9YY54 714 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-206ENST00000462613 LINC00473A8K010 186 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 SLC25A17O43808 307 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 NDUFA3O95167 84 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 CNIH1O95406 144 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 HLA-DRB1P01911 266 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 SERPINE2P07093 398 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 CTSDP07339 412 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-206ENST00000462613 VSIG10L2P0DP72 767 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 ANXA3P12429 323 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 RPA2P15927 270 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 NQO2P16083 231 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 VDAC1P21796 283 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 F2RP25116 425 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 GNRHRP30968 328 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 COMPP49747 757 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-206ENST00000462613 F2RL1P55085 397 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 PIGPP57054 158 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 TAS2R31P59538 309 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 BLCAPP62952 87 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 RBMS2Q15434 407 aaKnown RBP5.08□□□□□ -1.6
SF3B1-206ENST00000462613 TMEM177Q53S58 311 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 FAAP20Q6NZ36 180 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 PPP1R27Q86WC6 154 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 LHFPL1Q86WI0 220 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 SGPP2Q8IWX5 399 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 Q8N2B8 174 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 FAM71E2Q8N5Q1 922 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 COMMD1Q8N668 190 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 Q8N9W7 124 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 TEX45Q8NA69 505 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 OR4X2Q8NGF9 303 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 OR51S1Q8NGJ8 323 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 SPATA3Q8NHX4 192 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 LINC01006Q8NI28 216 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 RNASE11Q8TAA1 199 aaKnown RBP5.08□□□□□ -1.6
SF3B1-206ENST00000462613 MARCH1Q8TCQ1 289 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 CHPT1Q8WUD6 406 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 DDB2Q92466 427 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 TRIM63Q969Q1 353 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 SLC25A21Q9BQT8 299 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-206ENST00000462613 RSRP1Q9BUV0 290 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 FXYD6Q9H0Q3 95 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 FBXL15Q9H469 300 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 PLEKHA2Q9HB19 425 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 HRASLSQ9HDD0 168 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 SLC2A8Q9NY64 477 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 COMMD9Q9P000 198 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 KCNIP3Q9Y2W7 256 aa5.08□□□□□ -1.6
SF3B1-206ENST00000462613 LINC00854A0A1B0GVQ3 168 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 MPPED1O15442 326 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 PROP1O75360 226 aa5.07□□□□□ -1.6
SF3B1-206ENST00000462613 PGLYRP1O75594 196 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms