RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 GHITMQ9H3K2 345 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZMAT5Q9UDW3 170 aaKnown RBP6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 GAB2Q9UQC2 676 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 WASHC3Q9Y3C0 194 aa6.16□□□□□ -1.42
CDC42BPA-210ENST00000462553 LINC00473A8K010 186 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 SEC14L6B5MCN3 397 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 M0R1X1 148 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 RRHO14718 337 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 IGHG4P01861 327 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 HLA-DQB1P01920 261 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 NFYAP23511 347 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 PSMB8P28062 276 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 SOX6P35712 828 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 ECI1P42126 302 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 SSBP2P81877 361 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 EIF4EBP1Q13541 118 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 C19orf54Q5BKX5 351 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 CXorf66Q5JRM2 361 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 CNIH2Q6PI25 160 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 HOGA1Q86XE5 327 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 SAMD12Q8N8I0 201 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 C4orf3Q8WVX3 66 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 DDB2Q92466 427 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 RASL11BQ9BPW5 248 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 GINS4Q9BRT9 223 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 TPSG1Q9NRR2 321 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 GAR1Q9NY12 217 aaKnown RBP6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 ANXA10Q9UJ72 324 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZNF221Q9UK13 617 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZNF580Q9UK33 172 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 ZNF256Q9Y2P7 627 aaPredicted RBP6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 FBXO7Q9Y3I1 522 aa6.15□□□□□ -1.42
CDC42BPA-210ENST00000462553 MEIS3P1A6NDR6 274 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 ATP6V0E1O15342 81 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 HPGDSO60760 199 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 RBBP9O75884 186 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 SPDEFO95238 335 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 IGLV2-23P01705 113 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 IGF1P05019 195 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 FCER2P06734 321 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 CRYGBP07316 175 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 ELANEP08246 267 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 MC5RP33032 325 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 DUTP33316 252 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 CRIP2P52943 208 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 RPL30P62888 115 aaKnown RBP6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 KIAA0141Q14154 515 aaPredicted RBP6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 SPCS2Q15005 226 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 PSG5Q15238 335 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 MRGPRG-AS1Q2M3A8 158 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 GPR141Q7Z602 305 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 PDPNQ86YL7 162 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 ZNF645Q8N7E2 425 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 BEST4Q8NFU0 473 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 MUC7Q8TAX7 377 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 FBXL15Q9H469 300 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 GNB4Q9HAV0 340 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 DIABLOQ9NR28 239 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 SLC35D1Q9NTN3 355 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 COMMD3Q9UBI1 195 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 OR2W1Q9Y3N9 320 aa6.14□□□□□ -1.43
CDC42BPA-210ENST00000462553 SRRM4A7MD48 611 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 G3V318 75 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 H7C2Y5 167 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 I3L521 148 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 J3QRK9 145 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 FCN1O00602 326 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 APOA1P02647 267 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 APOA2P02652 100 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 CTXN2P0C2S0 81 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 EGR2P11161 476 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 NAT1P18440 290 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 ELK1P19419 428 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 AADACP22760 399 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 PPIFP30405 207 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 CBX5P45973 191 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 TMEM177Q53S58 311 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 TMEM69Q5SWH9 247 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 ZNF660Q6AZW8 331 aaPredicted RBP6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 SBSPONQ8IVN8 264 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 BVESQ8NE79 360 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 GPX8Q8TED1 209 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 ACOT12Q8WYK0 555 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 S100A16Q96FQ6 103 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 CMTM3Q96MX0 182 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 RCHY1Q96PM5 261 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 RNF5Q99942 180 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 MIXL1Q9H2W2 232 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 OR51J1Q9H342 316 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 KIAA1456Q9P272 454 aa6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 RBMX2Q9Y388 322 aaKnown RBP6.13□□□□□ -1.43
CDC42BPA-210ENST00000462553 LCE6AA0A183 80 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 ARPC1BO15143 372 aaKnown RBP6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 SLC25A17O43808 307 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 SOX15O60248 233 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 CA2P00918 260 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 IGLV1-40P01703 118 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 ZNF182P17025 639 aaPredicted RBP6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 RORCP51449 518 aa6.12□□□□□ -1.43
CDC42BPA-210ENST00000462553 BRWD1-AS2P59051 145 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms