RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 GNG2P59768 71 aa10.78□□□□□ -0.68
USP4-206ENST00000461553 VMA21Q3ZAQ7 101 aa10.78□□□□□ -0.68
USP4-206ENST00000461553 TMEM177Q53S58 311 aa10.78□□□□□ -0.68
USP4-206ENST00000461553 SFXN4Q6P4A7 337 aa10.78□□□□□ -0.68
USP4-206ENST00000461553 ZNF773Q6PK81 442 aa10.78□□□□□ -0.68
USP4-206ENST00000461553 BVESQ8NE79 360 aa10.78□□□□□ -0.68
USP4-206ENST00000461553 OR6Q1Q8NGQ2 317 aa10.78□□□□□ -0.68
USP4-206ENST00000461553 LGALS14Q8TCE9 139 aa10.78□□□□□ -0.68
USP4-206ENST00000461553 DLX4Q92988 240 aaPredicted RBP10.78□□□□□ -0.68
USP4-206ENST00000461553 YTHDF1Q9BYJ9 559 aaKnown RBP10.78□□□□□ -0.68
USP4-206ENST00000461553 RRP15Q9Y3B9 282 aaKnown RBP10.78□□□□□ -0.68
USP4-206ENST00000461553 LSM4Q9Y4Z0 139 aaKnown RBP10.78□□□□□ -0.68
USP4-206ENST00000461553 TENM3Q9P273 2699 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 IGKV1D-8A0A087WSZ0 117 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 C13orf42A0A1B0GVH6 325 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 TMEM235A6NFC5 223 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 CRYZL1O95825 349 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 HSPB1P04792 205 aaKnown RBP10.77□□□□□ -0.69
USP4-206ENST00000461553 SNRPBP14678 240 aaKnown RBP10.77□□□□□ -0.69
USP4-206ENST00000461553 CD36P16671 472 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 CDNFQ49AH0 187 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 HACD4Q5VWC8 232 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 ZNF645Q8N7E2 425 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 NUDCD2Q8WVJ2 157 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 TMEM68Q96MH6 324 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 PHB2Q99623 299 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 ELF5Q9UKW6 265 aaPredicted RBP10.77□□□□□ -0.69
USP4-206ENST00000461553 STAB2Q8WWQ8 2551 aa10.77□□□□□ -0.69
USP4-206ENST00000461553 A0A0G2JLM5 398 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 CREBL2O60519 120 aaPredicted RBP10.76□□□□□ -0.69
USP4-206ENST00000461553 CTXN2P0C2S0 81 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 NHLRC4P0CG21 123 aaPredicted RBP10.76□□□□□ -0.69
USP4-206ENST00000461553 DUTP33316 252 aaKnown RBP10.76□□□□□ -0.69
USP4-206ENST00000461553 SSBP2P81877 361 aaPredicted RBP10.76□□□□□ -0.69
USP4-206ENST00000461553 PJVKQ0ZLH3 352 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 KCTD9Q7L273 389 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 OSR1Q8TAX0 266 aaPredicted RBP10.76□□□□□ -0.69
USP4-206ENST00000461553 DDB2Q92466 427 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 RHOVQ96L33 236 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 WWC2-AS2Q96NR7 200 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 ST6GALNAC5Q9BVH7 336 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 OR51E2Q9H255 320 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 DCSTAMPQ9H295 470 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 RHBDL2Q9NX52 303 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 MRPS7Q9Y2R9 242 aaKnown RBP10.76□□□□□ -0.69
USP4-206ENST00000461553 SMAD5-AS1Q9Y6J3 95 aa10.76□□□□□ -0.69
USP4-206ENST00000461553 LINC00473A8K010 186 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 MPPED1O15442 326 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 CRYGBP07316 175 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 ZP3P21754 424 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 SCAND1P57086 179 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 UBE2KP61086 200 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 MXD1Q05195 221 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 TNXAQ16473 311 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 ACSM6Q6P461 480 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 OR5T1Q8NG75 326 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 ACOT12Q8WYK0 555 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 OR4C12Q96R67 309 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 ELOVL1Q9BW60 279 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 COA4Q9NYJ1 87 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 OR2W1Q9Y3N9 320 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 ETV7Q9Y603 341 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 U3KQK5 164 aa10.75□□□□□ -0.69
USP4-206ENST00000461553 DNAH7Q8WXX0 4024 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 LOC100506127A0A0U1RQW1 187 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 J3QRK9 145 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 SLC22A5O76082 557 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 GP9P14770 177 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 SPNP16150 400 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 NFYAP23511 347 aaPredicted RBP10.74□□□□□ -0.69
USP4-206ENST00000461553 SDC2P34741 201 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 NEDD8Q15843 81 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 CNIH2Q6PI25 160 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 IDO2Q6ZQW0 420 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 TEX45Q8NA69 505 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 RSRP1Q9BUV0 290 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 RANGRFQ9HD47 186 aaPredicted RBP10.74□□□□□ -0.69
USP4-206ENST00000461553 PRELID3BQ9Y3B1 194 aa10.74□□□□□ -0.69
USP4-206ENST00000461553 SRRM4A7MD48 611 aaKnown RBP10.73□□□□□ -0.69
USP4-206ENST00000461553 FCGR3BO75015 233 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 TUSC2O75896 110 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 ACTL6BO94805 426 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 SAA1P0DJI8 122 aaPredicted RBP10.73□□□□□ -0.69
USP4-206ENST00000461553 APELAP0DMC3 54 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 AADACP22760 399 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 ARPC4P59998 168 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 DEFA5Q01523 94 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 PRSS8Q16651 343 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 OR2B11Q5JQS5 317 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 IDNKQ5T6J7 187 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 SRSF12Q8WXF0 261 aaKnown RBP10.73□□□□□ -0.69
USP4-206ENST00000461553 DCUN1D5Q9BTE7 237 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 TINAGL1Q9GZM7 467 aaPredicted RBP10.73□□□□□ -0.69
USP4-206ENST00000461553 ANXA10Q9UJ72 324 aa10.73□□□□□ -0.69
USP4-206ENST00000461553 RBMX2Q9Y388 322 aaKnown RBP10.73□□□□□ -0.69
USP4-206ENST00000461553 ANKRD34BA5PLL1 514 aa10.72□□□□□ -0.69
USP4-206ENST00000461553 BRI3O95415 125 aa10.72□□□□□ -0.69
USP4-206ENST00000461553 HLA-DQB1P01920 261 aa10.72□□□□□ -0.69
USP4-206ENST00000461553 OR9G9P0C7N8 305 aa10.72□□□□□ -0.69
USP4-206ENST00000461553 CDK10Q15131 360 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms