RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 FGF9P31371 208 aaPredicted RBP11.96□□□□□ -0.49
NUP50-213ENST00000461437 SDC2P34741 201 aa11.96□□□□□ -0.49
NUP50-213ENST00000461437 TAGLNQ01995 201 aaKnown RBP11.96□□□□□ -0.49
NUP50-213ENST00000461437 TMEM267Q0VDI3 215 aaPredicted RBP11.96□□□□□ -0.49
NUP50-213ENST00000461437 NEDD8Q15843 81 aa11.96□□□□□ -0.49
NUP50-213ENST00000461437 MRGPRG-AS1Q2M3A8 158 aa11.96□□□□□ -0.49
NUP50-213ENST00000461437 AKIRIN2Q53H80 203 aa11.96□□□□□ -0.49
NUP50-213ENST00000461437 ZNF773Q6PK81 442 aa11.96□□□□□ -0.49
NUP50-213ENST00000461437 SSR3Q9UNL2 185 aa11.96□□□□□ -0.49
NUP50-213ENST00000461437 ZNF256Q9Y2P7 627 aaPredicted RBP11.96□□□□□ -0.49
NUP50-213ENST00000461437 ANKRD34BA5PLL1 514 aa11.95□□□□□ -0.5
NUP50-213ENST00000461437 CRYZL1O95825 349 aa11.95□□□□□ -0.5
NUP50-213ENST00000461437 FCER2P06734 321 aa11.95□□□□□ -0.5
NUP50-213ENST00000461437 PTHLHP12272 177 aa11.95□□□□□ -0.5
NUP50-213ENST00000461437 DUTP33316 252 aaKnown RBP11.95□□□□□ -0.5
NUP50-213ENST00000461437 TGFBR1P36897 503 aa11.95□□□□□ -0.5
NUP50-213ENST00000461437 OR2B11Q5JQS5 317 aa11.95□□□□□ -0.5
NUP50-213ENST00000461437 SFXN4Q6P4A7 337 aa11.95□□□□□ -0.5
NUP50-213ENST00000461437 TCTEX1D1Q8N7M0 179 aa11.95□□□□□ -0.5
NUP50-213ENST00000461437 Q9H521 79 aa11.95□□□□□ -0.5
NUP50-213ENST00000461437 IGKV1D-13A0A0B4J2D9 117 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 IGKV1-13P0DP09 117 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 SPNP16150 400 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 RANBP1P43487 201 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 RPL30P62888 115 aaKnown RBP11.94□□□□□ -0.5
NUP50-213ENST00000461437 TMEM177Q53S58 311 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 HACD4Q5VWC8 232 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 POC5Q8NA72 575 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 DDB2Q92466 427 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 FCGR1BQ92637 280 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 RHOVQ96L33 236 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 GPHA2Q96T91 129 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 CENPOQ9BU64 300 aa11.94□□□□□ -0.5
NUP50-213ENST00000461437 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.94□□□□□ -0.5
NUP50-213ENST00000461437 RBMXL2O75526 392 aaKnown RBP11.93□□□□□ -0.5
NUP50-213ENST00000461437 DTYMKP23919 212 aa11.93□□□□□ -0.5
NUP50-213ENST00000461437 TNXAQ16473 311 aa11.93□□□□□ -0.5
NUP50-213ENST00000461437 IDNKQ5T6J7 187 aa11.93□□□□□ -0.5
NUP50-213ENST00000461437 Q6ZS49 121 aa11.93□□□□□ -0.5
NUP50-213ENST00000461437 SLC25A38Q96DW6 304 aa11.93□□□□□ -0.5
NUP50-213ENST00000461437 RHBDL2Q9NX52 303 aa11.93□□□□□ -0.5
NUP50-213ENST00000461437 ADAM30Q9UKF2 790 aa11.93□□□□□ -0.5
NUP50-213ENST00000461437 TUSC2O75896 110 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 IGLV2-14P01704 120 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 TRBV12-3P01733 135 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 PRH1P02810 166 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 HSPB1P04792 205 aaKnown RBP11.92□□□□□ -0.5
NUP50-213ENST00000461437 CD36P16671 472 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 LGALS7P47929 136 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 GNG2P59768 71 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 RTL8BQ17RB0 113 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 C10orf55Q5SWW7 151 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 PYHIN1Q6K0P9 492 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 TPRA1Q86W33 373 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 VKORC1L1Q8N0U8 176 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 GVQW1Q8N7I0 195 aa11.92□□□□□ -0.5
NUP50-213ENST00000461437 YTHDF1Q9BYJ9 559 aaKnown RBP11.92□□□□□ -0.5
NUP50-213ENST00000461437 ZMAT5Q9UDW3 170 aaKnown RBP11.92□□□□□ -0.5
NUP50-213ENST00000461437 TRAV18A0A075B6X5 111 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 MSGN1A6NI15 193 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 FCGR3BO75015 233 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 DIRAS3O95661 229 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 CBX3Q13185 183 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 SRSF7Q16629 238 aaKnown RBP eCLIP11.91□□□□□ -0.5
NUP50-213ENST00000461437 ACSM6Q6P461 480 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 C19orf35Q6ZS72 473 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 OVCH2Q7RTZ1 564 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 ZNF645Q8N7E2 425 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 ACOT12Q8WYK0 555 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 PHB2Q99623 299 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 SLA2Q9H6Q3 261 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 COA4Q9NYJ1 87 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 OR2W1Q9Y3N9 320 aa11.91□□□□□ -0.5
NUP50-213ENST00000461437 C13orf42A0A1B0GVH6 325 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 MEIS3P1A6NDR6 274 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 TRIM64CA6NLI5 447 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 SAA1P0DJI8 122 aaPredicted RBP11.9□□□□□ -0.5
NUP50-213ENST00000461437 CD40LGP29965 261 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 PITPNAQ00169 270 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 PRSS8Q16651 343 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 VMA21Q3ZAQ7 101 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 KCTD9Q7L273 389 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 ZNF429Q86V71 674 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 DCUN1D5Q9BTE7 237 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 RSRP1Q9BUV0 290 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 ZNF430Q9H8G1 570 aaPredicted RBP11.9□□□□□ -0.5
NUP50-213ENST00000461437 SPATA2Q9UM82 520 aa11.9□□□□□ -0.5
NUP50-213ENST00000461437 RBMX2Q9Y388 322 aaKnown RBP11.9□□□□□ -0.5
NUP50-213ENST00000461437 TNFSF12O43508 249 aa11.89□□□□□ -0.51
NUP50-213ENST00000461437 HLA-DQB1P01920 261 aa11.89□□□□□ -0.51
NUP50-213ENST00000461437 INSL3P51460 131 aa11.89□□□□□ -0.51
NUP50-213ENST00000461437 UBE2KP61086 200 aa11.89□□□□□ -0.51
NUP50-213ENST00000461437 LSM3P62310 102 aaKnown RBP11.89□□□□□ -0.51
NUP50-213ENST00000461437 DCTN2Q13561 401 aaKnown RBP11.89□□□□□ -0.51
NUP50-213ENST00000461437 DYRK1AQ13627 763 aa11.89□□□□□ -0.51
NUP50-213ENST00000461437 ARL6IP1Q15041 203 aa11.89□□□□□ -0.51
NUP50-213ENST00000461437 CNIH2Q6PI25 160 aa11.89□□□□□ -0.51
NUP50-213ENST00000461437 SRSF12Q8WXF0 261 aaKnown RBP11.89□□□□□ -0.51
NUP50-213ENST00000461437 ADTRPQ96IZ2 230 aa11.89□□□□□ -0.51
NUP50-213ENST00000461437 TINAGL1Q9GZM7 467 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms