RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 KMT2EQ8IZD2 1858 aa1.92□□□□□ -2.1
CLK1-206ENST00000461326 YLPM1P49750 1951 aaKnown RBP1.92□□□□□ -2.1
CLK1-206ENST00000461326 SHANK1Q9Y566 2161 aa1.92□□□□□ -2.1
CLK1-206ENST00000461326 COL4A2P08572 1712 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 BRWD1Q9NSI6 2320 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 A8MWP4 228 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 GOLGA6L19H0YKK7 550 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 H3BMM0 161 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 TOX3O15405 576 aaPredicted RBP1.91□□□□□ -2.1
CLK1-206ENST00000461326 DENRO43583 198 aaKnown RBP1.91□□□□□ -2.1
CLK1-206ENST00000461326 BRI3O95415 125 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 CPSF4O95639 269 aaKnown RBP1.91□□□□□ -2.1
CLK1-206ENST00000461326 IGKV1D-33P01593 117 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 IGKV1-33P01594 117 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 PSKH1P11801 424 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 ZNF708P17019 499 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 HMGA1P17096 107 aaKnown RBP1.91□□□□□ -2.1
CLK1-206ENST00000461326 PVALBP20472 110 aaPredicted RBP1.91□□□□□ -2.1
CLK1-206ENST00000461326 CRABP2P29373 138 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 ACTR1BP42025 376 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 DLX6P56179 175 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 TPM4P67936 248 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 MYL5Q02045 173 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 DMTNQ08495 405 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 HTR4Q13639 388 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 PYCR3Q53H96 274 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 TMEM31Q5JXX7 168 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 ELP2Q6IA86 826 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 NIPAL1Q6NVV3 410 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 MARCH3Q86UD3 253 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 EIF4E3Q8N5X7 224 aaKnown RBP1.91□□□□□ -2.1
CLK1-206ENST00000461326 KRTCAP2Q8N6L1 136 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 OR5K1Q8NHB7 308 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 RNASEH2CQ8TDP1 164 aaKnown RBP1.91□□□□□ -2.1
CLK1-206ENST00000461326 UBE2WQ96B02 151 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 SMIM12Q96EX1 92 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 ZNF391Q9UJN7 358 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 DNAJC12Q9UKB3 198 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 MCTS1Q9ULC4 181 aaKnown RBP1.91□□□□□ -2.1
CLK1-206ENST00000461326 CCL26Q9Y258 94 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 COQ4Q9Y3A0 265 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.91□□□□□ -2.1
CLK1-206ENST00000461326 KIAA1549LQ6ZVL6 1849 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 BPTFQ12830 3046 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 DMXL1Q9Y485 3027 aa1.91□□□□□ -2.1
CLK1-206ENST00000461326 TRBV24-1A0A075B6N3 115 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 A0A0B4J2C4 111 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 ARGFXA6NJG6 315 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 GGTLC3B5MD39 225 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 C8orf87E5RJ46 101 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 H3BSA7 217 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 GPR171O14626 319 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 COCHO43405 550 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 SOX14O95416 240 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 GYPCP04921 128 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 PAEPP09466 180 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 FBP1P09467 338 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 OCMP0CE72 109 aaPredicted RBP1.9□□□□□ -2.11
CLK1-206ENST00000461326 CGB3P0DN86 165 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 CGB7P0DN87 165 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 GABRA1P14867 456 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 UCHL3P15374 230 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 ZNF3P17036 446 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 COL8A2P25067 703 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 TGFBR2P37173 567 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 CRATP43155 626 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 RAB2AP61019 212 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 SKP2Q13309 424 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 KRTAP21-2Q3LI59 83 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 TIMM23BQ5SRD1 257 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 HENMT1Q5T8I9 393 aaKnown RBP1.9□□□□□ -2.11
CLK1-206ENST00000461326 FAM45BPQ6NSW5 357 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 TTC33Q6PID6 262 aaPredicted RBP1.9□□□□□ -2.11
CLK1-206ENST00000461326 SPNS3Q6ZMD2 512 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 TCF24Q7RTU0 167 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 LY6G5BQ8NDX9 201 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 LFNGQ8NES3 379 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 OR52E4Q8NGH9 312 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 KCTD4Q8WVF5 259 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 GALMQ96C23 342 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 TMEM56Q96MV1 263 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 B9D2Q9BPU9 175 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 HIGD2AQ9BW72 106 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 FBXL15Q9H469 300 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 UBQLN4Q9NRR5 601 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 TMEM216Q9P0N5 145 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 FBXL3Q9UKT7 428 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 BTRCQ9Y297 605 aa1.9□□□□□ -2.11
CLK1-206ENST00000461326 ZNF443Q9Y2A4 671 aaPredicted RBP1.9□□□□□ -2.11
CLK1-206ENST00000461326 MYOFQ9NZM1 2061 aa1.89□□□□□ -2.11
CLK1-206ENST00000461326 NYNRINQ9P2P1 1898 aaKnown RBP1.89□□□□□ -2.11
CLK1-206ENST00000461326 FAM92AA1XBS5 289 aa1.89□□□□□ -2.11
CLK1-206ENST00000461326 MPZL2O60487 215 aa1.89□□□□□ -2.11
CLK1-206ENST00000461326 SH2D1AO60880 128 aa1.89□□□□□ -2.11
CLK1-206ENST00000461326 CBR3O75828 277 aa1.89□□□□□ -2.11
CLK1-206ENST00000461326 CDK14O94921 469 aa1.89□□□□□ -2.11
CLK1-206ENST00000461326 LTAP01374 205 aa1.89□□□□□ -2.11
CLK1-206ENST00000461326 IGHMP01871 453 aa1.89□□□□□ -2.11
CLK1-206ENST00000461326 OPN1SWP03999 348 aa1.89□□□□□ -2.11
CLK1-206ENST00000461326 APODP05090 189 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms