RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 VAX1Q5SQQ9 334 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 FOXB2Q5VYV0 432 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 ZNF66Q6ZN08 573 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 ZNF818PQ6ZRF7 136 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 KCTD9Q7L273 389 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 ZNF329Q86UD4 541 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 TMEM17Q86X19 198 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 MFSD4AQ8N468 514 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 ZBTB34Q8NCN2 500 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 OR6F1Q8NGZ6 308 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 SMIM4Q8WVI0 70 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 OR51J1Q9H342 316 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 TAS2R8Q9NYW2 309 aa16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 METTL1Q9UBP6 276 aaKnown RBP16.22■□□□□ 0.19
RPUSD3-210ENST00000460909 CRYZL1O95825 349 aa16.21■□□□□ 0.19
RPUSD3-210ENST00000460909 GNRHRP30968 328 aa16.21■□□□□ 0.19
RPUSD3-210ENST00000460909 HERV-K104P61576 105 aa16.21■□□□□ 0.19
RPUSD3-210ENST00000460909 NDPQ00604 133 aa16.21■□□□□ 0.19
RPUSD3-210ENST00000460909 CFHR3Q02985 330 aa16.21■□□□□ 0.19
RPUSD3-210ENST00000460909 IL18Q14116 193 aa16.21■□□□□ 0.19
RPUSD3-210ENST00000460909 DGCR14Q96DF8 476 aaKnown RBP16.21■□□□□ 0.19
RPUSD3-210ENST00000460909 HARBI1Q96MB7 349 aa16.21■□□□□ 0.19
RPUSD3-210ENST00000460909 FXYD6Q9H0Q3 95 aa16.21■□□□□ 0.19
RPUSD3-210ENST00000460909 TPSG1Q9NRR2 321 aa16.21■□□□□ 0.19
RPUSD3-210ENST00000460909 NDUFA13Q9P0J0 144 aa16.21■□□□□ 0.19
RPUSD3-210ENST00000460909 MGAM2Q2M2H8 2515 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 FBN3Q75N90 2809 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 NBEAL1Q6ZS30 2694 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 M0QYG6 137 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 M0QZ24 198 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 SHOXO15266 292 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 SLC25A17O43808 307 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 FCGR3BO75015 233 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 CD3DP04234 171 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 CX3CL1P78423 397 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 SSBP1Q04837 148 aaKnown RBP16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 CBX3Q13185 183 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 ACTBL2Q562R1 376 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 TINAGL1Q9GZM7 467 aaPredicted RBP16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 PRELID3BQ9Y3B1 194 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 FBXO7Q9Y3I1 522 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 CMYA5Q8N3K9 4069 aa16.2■□□□□ 0.18
RPUSD3-210ENST00000460909 ATP6V0E1O15342 81 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 TNFSF12O43508 249 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 CD74P04233 296 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 TBPP20226 339 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 SSBP2P81877 361 aaPredicted RBP16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 PLGLAQ15195 96 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 MRGPRG-AS1Q2M3A8 158 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 OR2B11Q5JQS5 317 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 AADACL3Q5VUY0 350 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 NDUFA11Q86Y39 141 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 TMEM229BQ8NBD8 167 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 OR4X2Q8NGF9 303 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 OSR1Q8TAX0 266 aaPredicted RBP16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 TCTEX1D2Q8WW35 142 aa16.19■□□□□ 0.18
RPUSD3-210ENST00000460909 FABP12A6NFH5 140 aa16.18■□□□□ 0.18
RPUSD3-210ENST00000460909 GSTZ1O43708 216 aaPredicted RBP16.18■□□□□ 0.18
RPUSD3-210ENST00000460909 TSPAN15O95858 294 aa16.18■□□□□ 0.18
RPUSD3-210ENST00000460909 EGR2P11161 476 aaPredicted RBP16.18■□□□□ 0.18
RPUSD3-210ENST00000460909 CRIP2P52943 208 aaPredicted RBP16.18■□□□□ 0.18
RPUSD3-210ENST00000460909 TSPAN5P62079 268 aa16.18■□□□□ 0.18
RPUSD3-210ENST00000460909 C2orf68Q2NKX9 166 aa16.18■□□□□ 0.18
RPUSD3-210ENST00000460909 ZNF562Q6V9R5 426 aa16.18■□□□□ 0.18
RPUSD3-210ENST00000460909 PPP1R27Q86WC6 154 aa16.18■□□□□ 0.18
RPUSD3-210ENST00000460909 OR4D10Q8NGI6 311 aa16.18■□□□□ 0.18
RPUSD3-210ENST00000460909 CLCC1Q96S66 551 aa16.18■□□□□ 0.18
RPUSD3-210ENST00000460909 CA2P00918 260 aa16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 PPIFP30405 207 aaKnown RBP16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 UBE2KP61086 200 aa16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 SLC35B1P78383 322 aa16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 PJVKQ0ZLH3 352 aa16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 C19orf54Q5BKX5 351 aa16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 RNASE10Q5GAN6 216 aaKnown RBP16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 LHFPL1Q86WI0 220 aa16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 BORCS5Q969J3 196 aa16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 GON7Q9BXV9 100 aa16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 PARP11Q9NR21 331 aa16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 V9GYH0 126 aa16.17■□□□□ 0.18
RPUSD3-210ENST00000460909 TCRBV4S1A1TA0A5B7 111 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 G3V318 75 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 UCP3P55916 312 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 TAS2R19P59542 299 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 NSUN5P1Q3KNT7 163 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 TREML4Q6UXN2 200 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 CCDC190Q86UF4 302 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 ARRDC1Q8N5I2 433 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 COMMD1Q8N668 190 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 RNF152Q8N8N0 203 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 TEX45Q8NA69 505 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 OR4S2Q8NH73 311 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 TSSC4Q9Y5U2 329 aaPredicted RBP16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 NUBP2Q9Y5Y2 271 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 WSB1Q9Y6I7 421 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 TNCP24821 2201 aa16.16■□□□□ 0.18
RPUSD3-210ENST00000460909 ARPC1BO15143 372 aaKnown RBP16.15■□□□□ 0.18
RPUSD3-210ENST00000460909 RBFOX2O43251 390 aaKnown RBP eCLIP16.15■□□□□ 0.18
RPUSD3-210ENST00000460909 RAMP3O60896 148 aa16.15■□□□□ 0.18
RPUSD3-210ENST00000460909 PGLYRP1O75594 196 aaPredicted RBP16.15■□□□□ 0.18
RPUSD3-210ENST00000460909 IGHG4P01861 327 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms