RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 LINC00473A8K010 186 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 ATP6V0E1O15342 81 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 SLC25A17O43808 307 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 CREBL2O60519 120 aaPredicted RBP12.69□□□□□ -0.38
CD28-203ENST00000458610 CNIH1O95406 144 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 CRYZL1O95825 349 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 IGHG4P01861 327 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 PMP2P02689 132 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 PF4P02776 101 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 CD40LGP29965 261 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 RFX2P48378 723 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 TSPAN5P62079 268 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 RPL23AP62750 156 aaKnown RBP12.69□□□□□ -0.38
CD28-203ENST00000458610 CATR1Q13166 79 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 ACTBL2Q562R1 376 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 HIST2H2BDQ6DRA6 164 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 MFSD4AQ8N468 514 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 TEX45Q8NA69 505 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 DYNC2LI1Q8TCX1 351 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 TCTEX1D2Q8WW35 142 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 ISOC1Q96CN7 298 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 CLCC1Q96S66 551 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 CCL28Q9NRJ3 127 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 WSB1Q9Y6I7 421 aa12.69□□□□□ -0.38
CD28-203ENST00000458610 FBN3Q75N90 2809 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 CCDC160A6NGH7 325 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 NUDT19A8MXV4 375 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 FCN1O00602 326 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 FCGR3BO75015 233 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 HLA-DMAP28067 261 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 FXYD4P59646 89 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 UBE2KP61086 200 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 MRPS10P82664 201 aaKnown RBP12.68□□□□□ -0.38
CD28-203ENST00000458610 CFHR3Q02985 330 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 LPCAT3Q6P1A2 487 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 LYSMD2Q8IV50 215 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 ZNF695Q8IW36 515 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 RNF152Q8N8N0 203 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 OR4S2Q8NH73 311 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 FCAMRQ8WWV6 532 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 TMEM68Q96MH6 324 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 ZNF2Q9BSG1 426 aaPredicted RBP12.68□□□□□ -0.38
CD28-203ENST00000458610 TAS2R8Q9NYW2 309 aa12.68□□□□□ -0.38
CD28-203ENST00000458610 H3BMQ9 156 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 CTDSP2O14595 271 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 CA2P00918 260 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 HRASP01112 189 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 IGLV2-14P01704 120 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 IGLV2-23P01705 113 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 S100GP29377 79 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 PPIFP30405 207 aaKnown RBP12.67□□□□□ -0.38
CD28-203ENST00000458610 CDX1P47902 265 aaPredicted RBP12.67□□□□□ -0.38
CD28-203ENST00000458610 CRIP2P52943 208 aaPredicted RBP12.67□□□□□ -0.38
CD28-203ENST00000458610 FXYD3Q14802 87 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 AKIRIN2Q53H80 203 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 PYHIN1Q6K0P9 492 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 TMEM17Q86X19 198 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 CMTM1Q8IZ96 169 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 POC5Q8NA72 575 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 VSTM2AQ8TAG5 236 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 CD300LFQ8TDQ1 290 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 ARPC1AQ92747 370 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 NUBP2Q9Y5Y2 271 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 CEPT1Q9Y6K0 416 aa12.67□□□□□ -0.38
CD28-203ENST00000458610 G3V318 75 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 ACTL6BO94805 426 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 IFNA6P05013 189 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 CRYGBP07316 175 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 TBPP20226 339 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 PSMB8P28062 276 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 HRH1P35367 487 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 MYCNOSP40205 109 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 ECSCRQ19T08 205 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 UNQ5815/PRO19632Q6UWF5 114 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 MINDY2Q8NBR6 621 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 KLHL30-AS1Q8NEE0 82 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 OR5M8Q8NGP6 311 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 MOB3AQ96BX8 217 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 DIRAS2Q96HU8 199 aa12.66□□□□□ -0.38
CD28-203ENST00000458610 FOXA2Q9Y261 457 aaPredicted RBP12.66□□□□□ -0.38
CD28-203ENST00000458610 SRRM4A7MD48 611 aaKnown RBP12.65□□□□□ -0.38
CD28-203ENST00000458610 RBFOX2O43251 390 aaKnown RBP eCLIP12.65□□□□□ -0.38
CD28-203ENST00000458610 IGLV1-40P01703 118 aa12.65□□□□□ -0.38
CD28-203ENST00000458610 RPLP1P05386 114 aaKnown RBP12.65□□□□□ -0.38
CD28-203ENST00000458610 CD33P20138 364 aa12.65□□□□□ -0.38
CD28-203ENST00000458610 GNB1P62873 340 aa12.65□□□□□ -0.38
CD28-203ENST00000458610 RPL30P62888 115 aaKnown RBP12.65□□□□□ -0.38
CD28-203ENST00000458610 SSBP1Q04837 148 aaKnown RBP12.65□□□□□ -0.38
CD28-203ENST00000458610 EIF4EBP1Q13541 118 aaPredicted RBP12.65□□□□□ -0.38
CD28-203ENST00000458610 VAX1Q5SQQ9 334 aa12.65□□□□□ -0.38
CD28-203ENST00000458610 WFDC9Q8NEX5 89 aa12.65□□□□□ -0.38
CD28-203ENST00000458610 C6orf62Q9GZU0 229 aaPredicted RBP12.65□□□□□ -0.38
CD28-203ENST00000458610 MIXL1Q9H2W2 232 aa12.65□□□□□ -0.38
CD28-203ENST00000458610 MTFP1Q9UDX5 166 aa12.65□□□□□ -0.38
CD28-203ENST00000458610 A3GALT2U3KPV4 340 aa12.65□□□□□ -0.38
CD28-203ENST00000458610 MGAM2Q2M2H8 2515 aa12.65□□□□□ -0.38
CD28-203ENST00000458610 A0A1W2PN81 502 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 GABARAPH6UMI1 98 aa12.64□□□□□ -0.39
CD28-203ENST00000458610 ZNF701M0R085 212 aaPredicted RBP12.64□□□□□ -0.39
CD28-203ENST00000458610 TNFSF12O43508 249 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms