RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 GDF9O60383 454 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 ZP4Q12836 540 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 OR4D5Q8NGN0 318 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 PIMREGQ9BSJ6 248 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 ZNF430Q9H8G1 570 aaPredicted RBP16.84■□□□□ 0.29
SNX27-204ENST00000458013 IGKV3D-20A0A0C4DH25 116 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 RRHO14718 337 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 EPOPA6NHQ4 379 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 NUP37Q8NFH4 326 aa16.84■□□□□ 0.29
SNX27-204ENST00000458013 AQP3Q92482 292 aa16.83■□□□□ 0.29
SNX27-204ENST00000458013 C5orf66Q9H5L9 145 aa16.83■□□□□ 0.29
SNX27-204ENST00000458013 WNT10AQ9GZT5 417 aa16.83■□□□□ 0.29
SNX27-204ENST00000458013 KLF14Q8TD94 323 aaPredicted RBP16.83■□□□□ 0.28
SNX27-204ENST00000458013 SLC25A47Q6Q0C1 308 aa16.83■□□□□ 0.28
SNX27-204ENST00000458013 FAM206AQ9NX38 181 aa16.83■□□□□ 0.28
SNX27-204ENST00000458013 ZNF107Q9UII5 783 aaPredicted RBP16.83■□□□□ 0.28
SNX27-204ENST00000458013 HIST1H1AQ02539 215 aaPredicted RBP16.83■□□□□ 0.28
SNX27-204ENST00000458013 ZNF658BQ4V348 819 aaPredicted RBP16.83■□□□□ 0.28
SNX27-204ENST00000458013 SLC25A45Q8N413 288 aa16.83■□□□□ 0.28
SNX27-204ENST00000458013 SLC25A38Q96DW6 304 aa16.83■□□□□ 0.28
SNX27-204ENST00000458013 H2BFSP57053 126 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 RND3P61587 244 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 ACSF3Q4G176 576 aaPredicted RBP16.82■□□□□ 0.28
SNX27-204ENST00000458013 KCNK17Q96T54 332 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 FOXJ2Q9P0K8 574 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 TSPAN13O95857 204 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 PRDM6Q9NQX0 595 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 LCN2P80188 198 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 COX19Q49B96 90 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 ZNRF1Q8ND25 227 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 FAM131CQ96AQ9 280 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 CENPVQ7Z7K6 275 aaPredicted RBP16.82■□□□□ 0.28
SNX27-204ENST00000458013 ZCCHC14Q8WYQ9 949 aaKnown RBP16.82■□□□□ 0.28
SNX27-204ENST00000458013 KCNE5Q9UJ90 142 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 A0A1B0GV90 55 aa16.82■□□□□ 0.28
SNX27-204ENST00000458013 ZNF506Q5JVG8 444 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 NPFFO15130 113 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 TMEM136Q6ZRR5 245 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 GCSAMQ8N6F7 178 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 PPP1R3EQ9H7J1 279 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 ZNF98A6NK75 572 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 MARCH11A6NNE9 402 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 ERVH48-1M5A8F1 160 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 MEF2BQ02080 365 aaPredicted RBP16.81■□□□□ 0.28
SNX27-204ENST00000458013 TNFRSF9Q07011 255 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 LINC00305Q7Z4B0 112 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 FADS6Q8N9I5 356 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 GPR132Q9UNW8 380 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 ZNF646O15015 1829 aaPredicted RBP16.81■□□□□ 0.28
SNX27-204ENST00000458013 RBFOX2O43251 390 aaKnown RBP eCLIP16.81■□□□□ 0.287e-16■■■■■ 58.5
SNX27-204ENST00000458013 OR11H4Q8NGC9 324 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 LOC105371242A0A075B767 164 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 MFAP4P55083 255 aa16.81■□□□□ 0.28
SNX27-204ENST00000458013 TFF1P04155 84 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 NMBP08949 121 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 DNAJC4Q9NNZ3 241 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 NPIPB6E9PJ23 425 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 IMMP2LQ96T52 175 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 TUBD1Q9UJT1 453 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 ARFGEF1Q9Y6D6 1849 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 CACNA1CQ13936 2221 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 TIAF1O95411 115 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 DLEC1Q9Y238 1755 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 IGLV1-36A0A0B4J1U3 117 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 TRBV5-5A0A0J9YX44 114 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 VAX1Q5SQQ9 334 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 LINC00470Q9BZP3 86 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 PILRAQ9UKJ1 303 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 GCM2O75603 506 aaPredicted RBP16.8■□□□□ 0.28
SNX27-204ENST00000458013 FOXA3P55318 350 aaPredicted RBP16.8■□□□□ 0.28
SNX27-204ENST00000458013 CLPPQ16740 277 aaPredicted RBP16.8■□□□□ 0.28
SNX27-204ENST00000458013 NPIPB3Q92617 1050 aa16.8■□□□□ 0.28
SNX27-204ENST00000458013 AGAP20933 346 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 CBLN1P23435 193 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 TFF3Q07654 80 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 ODAMA1E959 279 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 CELA3AP09093 270 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 SLC17A3O00476 420 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 STPG3Q8N7X2 389 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 RAX2Q96IS3 184 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 LY75O60449 1722 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 USP54Q70EL1 1684 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 TMEM238LA0A1B0GVL6 79 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 A6NJY4 79 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 PSG9Q00887 426 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.79■□□□□ 0.28
SNX27-204ENST00000458013 LHFPL4Q7Z7J7 247 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 TMEM45BQ96B21 275 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 MRAP2Q96G30 205 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 SFRP2Q96HF1 295 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 KIF13BQ9NQT8 1826 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 MPDU1O75352 247 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 TRGC1P0CF51 173 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 G6PC2Q9NQR9 355 aa16.79■□□□□ 0.28
SNX27-204ENST00000458013 PIN1P1O15428 100 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 COX6A1P12074 109 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 SERF2P84101 59 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 SPAG17Q6Q759 2223 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 TRAV8-6A0A0B4J262 113 aa16.78■□□□□ 0.28
SNX27-204ENST00000458013 ATP5J2P56134 94 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms