RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 KIR2DS2P43631 304 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 RPL30P62888 115 aaKnown RBP11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 EIF4EBP1Q13541 118 aaPredicted RBP11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 PLGLAQ15195 96 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 AWAT1Q58HT5 328 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 AADACL3Q5VUY0 350 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 TRIQKQ629K1 86 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 ZNF57Q68EA5 555 aaPredicted RBP11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 FAAP20Q6NZ36 180 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 LHFPL1Q86WI0 220 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 Q8N2B8 174 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 POC5Q8NA72 575 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 DEDD2Q8WXF8 326 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 PRRT1Q99946 306 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 RSRP1Q9BUV0 290 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 ZNF702PQ9H963 129 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 MCUBQ9NWR8 336 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 SCP2D1Q9UJQ7 156 aa11.62□□□□□ -0.55
NCKIPSD-207ENST00000453349 HAX1O00165 279 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 RRHO14718 337 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 NDUFA3O95167 84 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 CRYZL1O95825 349 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 BAK1Q16611 211 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 TMEM177Q53S58 311 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 OR2B11Q5JQS5 317 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 LIN54Q6MZP7 749 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 Q6ZS46 218 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 OSR1Q8TAX0 266 aaPredicted RBP11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 TRIM63Q969Q1 353 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 ZNF486Q96H40 463 aaPredicted RBP11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 GPHA2Q96T91 129 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 SIGLEC9Q9Y336 463 aa11.61□□□□□ -0.55
NCKIPSD-207ENST00000453349 SH2D7A6NKC9 451 aaPredicted RBP11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 SPDEFO95238 335 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 VDAC2P45880 294 aaPredicted RBP11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 PPP5CP53041 499 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 KLF9Q13886 244 aaPredicted RBP11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 PSG5Q15238 335 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 PHLDA2Q53GA4 152 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 FAM71E2Q8N5Q1 922 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 C3orf56Q8N813 242 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 OR51S1Q8NGJ8 323 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 OR51H1Q8NH63 302 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 OR4S2Q8NH73 311 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 CD300LFQ8TDQ1 290 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 HARBI1Q96MB7 349 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 SCGB3A2Q96PL1 93 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 AIFM2Q9BRQ8 373 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 HRASLSQ9HDD0 168 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 AKIP1Q9NQ31 210 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 METTL1Q9UBP6 276 aaKnown RBP11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 ZFHX3Q15911 3703 aa11.6□□□□□ -0.55
NCKIPSD-207ENST00000453349 RLN1P04808 185 aa11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 C5orf64Q2M2E5 130 aa11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 VMA21Q3ZAQ7 101 aa11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 IDO2Q6ZQW0 420 aa11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 SLC35E3Q7Z769 313 aa11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 SPAG16Q8N0X2 631 aa11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 TCTEX1D1Q8N7M0 179 aa11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 MARCH1Q8TCQ1 289 aa11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 SDHCQ99643 169 aaPredicted RBP11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 FBXL15Q9H469 300 aa11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 SLC2A8Q9NY64 477 aa11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 C14orf166Q9Y224 244 aaKnown RBP11.59□□□□□ -0.55
NCKIPSD-207ENST00000453349 SETD2Q9BYW2 2564 aaPredicted RBP11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 CENPXA8MT69 81 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 KCNAB3O43448 404 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 SLC25A17O43808 307 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 HPRT1P00492 218 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 HRASP01112 189 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 IGHG2P01859 326 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 VSIG10L2P0DP72 767 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 ZNF846Q147U1 533 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 SURF2Q15527 256 aaPredicted RBP11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 CENPVQ7Z7K6 275 aaPredicted RBP11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 TBC1D26Q86UD7 250 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 FOXRED2Q8IWF2 684 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 CCDC71LQ8N9Z2 235 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 TEX45Q8NA69 505 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 OR13C8Q8NGS7 320 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 SPATA3Q8NHX4 192 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 CLCC1Q96S66 551 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 WDR12Q9GZL7 423 aaKnown RBP11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 SERTAD4Q9NUC0 356 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 COPZ2Q9P299 210 aa11.58□□□□□ -0.56
NCKIPSD-207ENST00000453349 NAP1L6A6NFF2 107 aa11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 SRRM4A7MD48 611 aaKnown RBP11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 MPPED1O15442 326 aa11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 RBFOX2O43251 390 aaKnown RBP eCLIP11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 IGLV2-23P01705 113 aa11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 HLA-DRB1P01911 266 aa11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 CTSDP07339 412 aaPredicted RBP11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 IL7P13232 177 aa11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 PI3P19957 117 aa11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 F2RP25116 425 aa11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 CD40LGP29965 261 aa11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 PIGPP57054 158 aa11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 PROK1P58294 105 aa11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 BRWD1-AS2P59051 145 aa11.57□□□□□ -0.56
NCKIPSD-207ENST00000453349 RND3P61587 244 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms