RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 TMEM177Q53S58 311 aa8.29□□□□□ -1.08
USP1-204ENST00000452143 OGFRL1Q5TC84 451 aaPredicted RBP8.29□□□□□ -1.08
USP1-204ENST00000452143 LAX1Q8IWV1 398 aa8.29□□□□□ -1.08
USP1-204ENST00000452143 BVESQ8NE79 360 aa8.29□□□□□ -1.08
USP1-204ENST00000452143 CABLES2Q9BTV7 478 aa8.29□□□□□ -1.08
USP1-204ENST00000452143 PECRQ9BY49 303 aa8.29□□□□□ -1.08
USP1-204ENST00000452143 VCXQ9H320 206 aa8.29□□□□□ -1.08
USP1-204ENST00000452143 GAR1Q9NY12 217 aaKnown RBP8.29□□□□□ -1.08
USP1-204ENST00000452143 COA4Q9NYJ1 87 aa8.29□□□□□ -1.08
USP1-204ENST00000452143 PEMTQ9UBM1 199 aa8.29□□□□□ -1.08
USP1-204ENST00000452143 SHISA3A0PJX4 238 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 CASQ2O14958 399 aaPredicted RBP8.28□□□□□ -1.08
USP1-204ENST00000452143 SHOXO15266 292 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 FABP7O15540 132 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 AIREO43918 545 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 CSN3P07498 182 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 PLAC9Q5JTB6 97 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 LIPKQ5VXJ0 399 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 ADAD2Q8NCV1 583 aaKnown RBP8.28□□□□□ -1.08
USP1-204ENST00000452143 OR10J5Q8NHC4 309 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 IL17DQ8TAD2 202 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 SNAPC3Q92966 411 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 PHB2Q99623 299 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 GFI1Q99684 422 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 CENPOQ9BU64 300 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 TUBA4BQ9H853 241 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 SDHAF2Q9NX18 166 aa8.28□□□□□ -1.08
USP1-204ENST00000452143 TRBV6-7A0A0A0MS04 114 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 FAM223BA6NKX1 122 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 PTGES3LE9PB15 166 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 BET1O15155 118 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 DENRO43583 198 aaKnown RBP8.27□□□□□ -1.09
USP1-204ENST00000452143 CREBL2O60519 120 aaPredicted RBP8.27□□□□□ -1.09
USP1-204ENST00000452143 JTBO76095 146 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 TRBV12-3P01733 135 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 FCGR3AP08637 254 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 CD3GP09693 182 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 PSMD7P51665 324 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 UBE2KP61086 200 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 TPBGQ13641 420 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 VMA21Q3ZAQ7 101 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 FAM209BQ5JX69 171 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 ADAMTSL5Q6ZMM2 481 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 FAM223AQ8IWN6 122 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 TEX45Q8NA69 505 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 SRSF12Q8WXF0 261 aaKnown RBP8.27□□□□□ -1.09
USP1-204ENST00000452143 TMEM203Q969S6 136 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 FAM3DQ96BQ1 224 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 ADTRPQ96IZ2 230 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 SCN3BQ9NY72 215 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 NKX1-2Q9UD57 310 aaPredicted RBP8.27□□□□□ -1.09
USP1-204ENST00000452143 AK6Q9Y3D8 172 aaKnown RBP8.27□□□□□ -1.09
USP1-204ENST00000452143 CEPT1Q9Y6K0 416 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 ALMS1Q8TCU4 4167 aa8.27□□□□□ -1.09
USP1-204ENST00000452143 PLECQ15149 4684 aaKnown RBP8.26□□□□□ -1.09
USP1-204ENST00000452143 MPPED1O15442 326 aa8.26□□□□□ -1.09
USP1-204ENST00000452143 OR9G9P0C7N8 305 aa8.26□□□□□ -1.09
USP1-204ENST00000452143 CALRP27797 417 aaKnown RBP8.26□□□□□ -1.09
USP1-204ENST00000452143 MECP2P51608 486 aaKnown RBP8.26□□□□□ -1.09
USP1-204ENST00000452143 DEFA5Q01523 94 aa8.26□□□□□ -1.09
USP1-204ENST00000452143 IRF3Q14653 427 aa8.26□□□□□ -1.09
USP1-204ENST00000452143 PRSS8Q16651 343 aa8.26□□□□□ -1.09
USP1-204ENST00000452143 MRGPRG-AS1Q2M3A8 158 aa8.26□□□□□ -1.09
USP1-204ENST00000452143 IGSF11Q5DX21 431 aa8.26□□□□□ -1.09
USP1-204ENST00000452143 TMEM91Q6ZNR0 172 aa8.26□□□□□ -1.09
USP1-204ENST00000452143 OSR1Q8TAX0 266 aaPredicted RBP8.26□□□□□ -1.09
USP1-204ENST00000452143 DDB2Q92466 427 aa8.26□□□□□ -1.09
USP1-204ENST00000452143 RAB3CQ96E17 227 aa8.26□□□□□ -1.09
USP1-204ENST00000452143 SLC2A8Q9NY64 477 aa8.26□□□□□ -1.09
USP1-204ENST00000452143 ZNF230Q9UIE0 474 aaPredicted RBP8.26□□□□□ -1.09
USP1-204ENST00000452143 TRBV9A0A0B4J1U6 114 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 TMEM272A0A1B0GTI8 110 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 MSGN1A6NI15 193 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 SRRM4A7MD48 611 aaKnown RBP8.25□□□□□ -1.09
USP1-204ENST00000452143 BMPR1BO00238 502 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 TUSC2O75896 110 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 TPPPO94811 219 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 HSMCR30P0CW71 290 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 GADD45AP24522 165 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 DUTP33316 252 aaKnown RBP8.25□□□□□ -1.09
USP1-204ENST00000452143 CLDN12P56749 244 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 CD81P60033 236 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 RPS25P62851 125 aaKnown RBP8.25□□□□□ -1.09
USP1-204ENST00000452143 MLLT11Q13015 90 aaPredicted RBP8.25□□□□□ -1.09
USP1-204ENST00000452143 EXOSC2Q13868 293 aaKnown RBP8.25□□□□□ -1.09
USP1-204ENST00000452143 TNXAQ16473 311 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 C2orf76Q3KRA6 126 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 LINC00322Q6ZN03 302 aaPredicted RBP8.25□□□□□ -1.09
USP1-204ENST00000452143 Q6ZS49 121 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 ACOT12Q8WYK0 555 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 C5orf30Q96GV9 206 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 SPIN2AQ99865 258 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 SPIN2BQ9BPZ2 258 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 GINS4Q9BRT9 223 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 HIPK2Q9H2X6 1198 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 ACOT13Q9NPJ3 140 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 ADAM30Q9UKF2 790 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 RAB22AQ9UL26 194 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 KCNK7Q9Y2U2 307 aa8.25□□□□□ -1.09
USP1-204ENST00000452143 TPRKBQ9Y3C4 175 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms