RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 PJVKQ0ZLH3 352 aa14.99□□□□□ -0.01
USP40-207ENST00000450940 RTL8BQ17RB0 113 aa14.99□□□□□ -0.01
USP40-207ENST00000450940 MRGPRG-AS1Q2M3A8 158 aa14.99□□□□□ -0.01
USP40-207ENST00000450940 CNIH2Q6PI25 160 aa14.99□□□□□ -0.01
USP40-207ENST00000450940 NUDCD2Q8WVJ2 157 aa14.99□□□□□ -0.01
USP40-207ENST00000450940 DCUN1D4Q92564 292 aa14.99□□□□□ -0.01
USP40-207ENST00000450940 HARBI1Q96MB7 349 aa14.99□□□□□ -0.01
USP40-207ENST00000450940 B9D2Q9BPU9 175 aa14.99□□□□□ -0.01
USP40-207ENST00000450940 ALX4Q9H161 411 aaPredicted RBP14.99□□□□□ -0.01
USP40-207ENST00000450940 OR2W1Q9Y3N9 320 aa14.99□□□□□ -0.01
USP40-207ENST00000450940 LSM4Q9Y4Z0 139 aaKnown RBP14.99□□□□□ -0.01
USP40-207ENST00000450940 LINC00473A8K010 186 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 H3BUA1 57 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 TMEM127O75204 238 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 CD40LGP29965 261 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 MXD1Q05195 221 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 CBX3Q13185 183 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 NEDD8Q15843 81 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 TEX45Q8NA69 505 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 OR5H6Q8NGV6 325 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 SLC25A38Q96DW6 304 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 TMEM68Q96MH6 324 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 ANXA10Q9UJ72 324 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 SORL1Q92673 2214 aa14.98□□□□□ -0.01
USP40-207ENST00000450940 A0A0A6YYH2 397 aa14.97□□□□□ -0.01
USP40-207ENST00000450940 LOC100506127A0A0U1RQW1 187 aa14.97□□□□□ -0.01
USP40-207ENST00000450940 A6NJ64 397 aa14.97□□□□□ -0.01
USP40-207ENST00000450940 LINC01619G3V211 115 aa14.97□□□□□ -0.01
USP40-207ENST00000450940 OVOL1O14753 267 aa14.97□□□□□ -0.01
USP40-207ENST00000450940 SHOXO15266 292 aa14.97□□□□□ -0.01
USP40-207ENST00000450940 SLC22A5O76082 557 aa14.97□□□□□ -0.01
USP40-207ENST00000450940 GNG2P59768 71 aa14.97□□□□□ -0.01
USP40-207ENST00000450940 ZNF645Q8N7E2 425 aa14.97□□□□□ -0.01
USP40-207ENST00000450940 GRPEL2Q8TAA5 225 aa14.97□□□□□ -0.01
USP40-207ENST00000450940 DLX4Q92988 240 aaPredicted RBP14.97□□□□□ -0.01
USP40-207ENST00000450940 MS4A10Q96PG2 267 aa14.97□□□□□ -0.01
USP40-207ENST00000450940 IGHV4OR15-8A0A075B7B6 117 aa14.96□□□□□ -0.01
USP40-207ENST00000450940 A0A087WW49 117 aa14.96□□□□□ -0.01
USP40-207ENST00000450940 TUSC2O75896 110 aa14.96□□□□□ -0.01
USP40-207ENST00000450940 CNIH1O95406 144 aa14.96□□□□□ -0.01
USP40-207ENST00000450940 IGLV2-14P01704 120 aa14.96□□□□□ -0.01
USP40-207ENST00000450940 HSPB1P04792 205 aaKnown RBP14.96□□□□□ -0.01
USP40-207ENST00000450940 NFYAP23511 347 aaPredicted RBP14.96□□□□□ -0.01
USP40-207ENST00000450940 TPPP2P59282 170 aa14.96□□□□□ -0.01
USP40-207ENST00000450940 UBE2KP61086 200 aa14.96□□□□□ -0.01
USP40-207ENST00000450940 ZNF429Q86V71 674 aa14.96□□□□□ -0.01
USP40-207ENST00000450940 POC5Q8NA72 575 aa14.96□□□□□ -0.01
USP40-207ENST00000450940 OSR1Q8TAX0 266 aaPredicted RBP14.96□□□□□ -0.01
USP40-207ENST00000450940 TRGV3P03979 118 aa14.95□□□□□ -0.02
USP40-207ENST00000450940 ECI1P42126 302 aa14.95□□□□□ -0.02
USP40-207ENST00000450940 SLURP1P55000 103 aa14.95□□□□□ -0.02
USP40-207ENST00000450940 IDNKQ5T6J7 187 aa14.95□□□□□ -0.02
USP40-207ENST00000450940 RBMX2Q9Y388 322 aaKnown RBP14.95□□□□□ -0.02
USP40-207ENST00000450940 TRAV18A0A075B6X5 111 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 IGKV1D-13A0A0B4J2D9 117 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 CRYZL1O95825 349 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 IGHV3-11P01762 117 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 IGKV1-13P0DP09 117 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 CD69Q07108 199 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 EIF4EBP1Q13541 118 aaPredicted RBP14.94□□□□□ -0.02
USP40-207ENST00000450940 PRSS8Q16651 343 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 VMA21Q3ZAQ7 101 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 VAX1Q5SQQ9 334 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 OVCH2Q7RTZ1 564 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 OR5T1Q8NG75 326 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 PRR25Q96S07 402 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 SPATA2Q9UM82 520 aa14.94□□□□□ -0.02
USP40-207ENST00000450940 ZNF256Q9Y2P7 627 aaPredicted RBP14.94□□□□□ -0.02
USP40-207ENST00000450940 A0A0G2JLM5 398 aa14.93□□□□□ -0.02
USP40-207ENST00000450940 TIMM50Q3ZCQ8 353 aa14.93□□□□□ -0.02
USP40-207ENST00000450940 ACSM6Q6P461 480 aa14.93□□□□□ -0.02
USP40-207ENST00000450940 HOGA1Q86XE5 327 aa14.93□□□□□ -0.02
USP40-207ENST00000450940 CROCCP3Q8IVE0 287 aa14.93□□□□□ -0.02
USP40-207ENST00000450940 AUNIPQ9H7T9 357 aa14.93□□□□□ -0.02
USP40-207ENST00000450940 J3QRK9 145 aa14.92□□□□□ -0.02
USP40-207ENST00000450940 AADACP22760 399 aa14.92□□□□□ -0.02
USP40-207ENST00000450940 RPL30P62888 115 aaKnown RBP14.92□□□□□ -0.02
USP40-207ENST00000450940 C11orf87Q6NUJ2 197 aa14.92□□□□□ -0.02
USP40-207ENST00000450940 BEST4Q8NFU0 473 aa14.92□□□□□ -0.02
USP40-207ENST00000450940 YIPF6Q96EC8 236 aa14.92□□□□□ -0.02
USP40-207ENST00000450940 HSD17B10Q99714 261 aaKnown RBP14.92□□□□□ -0.02
USP40-207ENST00000450940 TINAGL1Q9GZM7 467 aaPredicted RBP14.92□□□□□ -0.02
USP40-207ENST00000450940 DIABLOQ9NR28 239 aa14.92□□□□□ -0.02
USP40-207ENST00000450940 ZNF355PQ9NSJ1 428 aa14.92□□□□□ -0.02
USP40-207ENST00000450940 PRELID3BQ9Y3B1 194 aa14.92□□□□□ -0.02
USP40-207ENST00000450940 A0A087WXM4 84 aa14.91□□□□□ -0.02
USP40-207ENST00000450940 MSGN1A6NI15 193 aa14.91□□□□□ -0.02
USP40-207ENST00000450940 FCGR3BO75015 233 aa14.91□□□□□ -0.02
USP40-207ENST00000450940 CDK10Q15131 360 aa14.91□□□□□ -0.02
USP40-207ENST00000450940 MSMO1Q15800 293 aa14.91□□□□□ -0.02
USP40-207ENST00000450940 KCTD9Q7L273 389 aa14.91□□□□□ -0.02
USP40-207ENST00000450940 GVQW1Q8N7I0 195 aa14.91□□□□□ -0.02
USP40-207ENST00000450940 TSPAN14Q8NG11 270 aa14.91□□□□□ -0.02
USP40-207ENST00000450940 RANGRFQ9HD47 186 aaPredicted RBP14.91□□□□□ -0.02
USP40-207ENST00000450940 C13orf42A0A1B0GVH6 325 aa14.9□□□□□ -0.02
USP40-207ENST00000450940 AIREO43918 545 aa14.9□□□□□ -0.02
USP40-207ENST00000450940 NHLRC4P0CG21 123 aaPredicted RBP14.9□□□□□ -0.02
USP40-207ENST00000450940 SAA1P0DJI8 122 aaPredicted RBP14.9□□□□□ -0.02
USP40-207ENST00000450940 BRWD1-AS2P59051 145 aa14.9□□□□□ -0.02
USP40-207ENST00000450940 ZNF66Q6ZN08 573 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms