RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 SRRM4A7MD48 611 aaKnown RBP10.15□□□□□ -0.78
CPSF7-207ENST00000449811 OR2J3O76001 311 aa10.15□□□□□ -0.78
CPSF7-207ENST00000449811 LALBAP00709 142 aa10.15□□□□□ -0.78
CPSF7-207ENST00000449811 CBX3Q13185 183 aa10.15□□□□□ -0.78
CPSF7-207ENST00000449811 PRSS8Q16651 343 aa10.15□□□□□ -0.78
CPSF7-207ENST00000449811 OR10K2Q6IF99 312 aa10.15□□□□□ -0.78
CPSF7-207ENST00000449811 BTNL8Q6UX41 500 aa10.15□□□□□ -0.78
CPSF7-207ENST00000449811 STPG3Q8N7X2 389 aa10.15□□□□□ -0.78
CPSF7-207ENST00000449811 NKAIN3Q8N8D7 197 aa10.15□□□□□ -0.78
CPSF7-207ENST00000449811 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.15□□□□□ -0.78
CPSF7-207ENST00000449811 OR1L6Q8NGR2 347 aa10.15□□□□□ -0.78
CPSF7-207ENST00000449811 ACOT12Q8WYK0 555 aa10.15□□□□□ -0.78
CPSF7-207ENST00000449811 KIR2DL5BA0A0G2JN68 375 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 KIR2DL5BA0A0G2JPC4 375 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 A8MWP6 167 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 SCTP09683 121 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 RPS27AP62979 156 aaKnown RBP10.14□□□□□ -0.79
CPSF7-207ENST00000449811 VMA21Q3ZAQ7 101 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 TMEM177Q53S58 311 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 GLT8D1Q68CQ7 371 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 IDO2Q6ZQW0 420 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 RBPMS2Q6ZRY4 209 aaKnown RBP10.14□□□□□ -0.79
CPSF7-207ENST00000449811 KIR2DL5AQ8N109 375 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 ZFP41Q8N8Y5 198 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 TEX45Q8NA69 505 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 KIR2DL5BQ8NHK3 375 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 FBLIM1Q8WUP2 373 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 PGLYRP3Q96LB9 341 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 SLC29A1Q99808 456 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 RIMS4Q9H426 269 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-207ENST00000449811 FGF20Q9NP95 211 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-207ENST00000449811 FBXL17Q9UF56 701 aa10.14□□□□□ -0.79
CPSF7-207ENST00000449811 TRBV6-6A0A0A6YYG2 114 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 TRAV25A0A0B4J276 109 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 A0A1B0GVY2 172 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 ATP8B1O43520 1251 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 IFNA4P05014 189 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 UBBP0CG47 229 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 DCKP27707 260 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 HTR2CP28335 458 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 ARL3P36405 182 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 NANOS2P60321 138 aaKnown RBP10.13□□□□□ -0.79
CPSF7-207ENST00000449811 UBE2KP61086 200 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 RBMS2Q15434 407 aaKnown RBP10.13□□□□□ -0.79
CPSF7-207ENST00000449811 RTL8BQ17RB0 113 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 FAM106AQ4KMX7 169 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 C1orf146Q5VVC0 180 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 OR4A47Q6IF82 309 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 SLC38A6Q8IZM9 456 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 TTC9CQ8N5M4 171 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 OR2C3Q8N628 320 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 DERL3Q96Q80 235 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 SPIN2AQ99865 258 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 SPIN2BQ9BPZ2 258 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 NICN1Q9BSH3 213 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 HDHD3Q9BSH5 251 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-207ENST00000449811 TMEM59Q9BXS4 323 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 MFFQ9GZY8 342 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 PLEKHJ1Q9NW61 149 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 RDH8Q9NYR8 311 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 UBQLN2Q9UHD9 624 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 MGAT4AQ9UM21 535 aa10.13□□□□□ -0.79
CPSF7-207ENST00000449811 ACTL6BO94805 426 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 IGHV3-23P01764 117 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 CTRB1P17538 263 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 TCTAP57738 103 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 TAGLNQ01995 201 aaKnown RBP10.12□□□□□ -0.79
CPSF7-207ENST00000449811 CTRB2Q6GPI1 263 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 CLEC19AQ6UXS0 136 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 C11orf45Q8TAV5 145 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 C2CD4CQ8TF44 421 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 APH1BQ8WW43 257 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 CCDC140Q96MF4 163 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 TM2D1Q9BX74 207 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 OR2D2Q9H210 308 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 SDHAF2Q9NX18 166 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 AK3Q9UIJ7 227 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 HSPG2P98160 4391 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 PKD1P98161 4303 aa10.12□□□□□ -0.79
CPSF7-207ENST00000449811 MUC4Q99102 2169 aa10.11□□□□□ -0.79
CPSF7-207ENST00000449811 IGKV1-6A0A0C4DH72 117 aa10.11□□□□□ -0.79
CPSF7-207ENST00000449811 RRASP10301 218 aa10.11□□□□□ -0.79
CPSF7-207ENST00000449811 RPL35AP18077 110 aaKnown RBP10.11□□□□□ -0.79
CPSF7-207ENST00000449811 MYL12AP19105 171 aa10.11□□□□□ -0.79
CPSF7-207ENST00000449811 SMN1Q16637 294 aaKnown RBP10.11□□□□□ -0.79
CPSF7-207ENST00000449811 C10orf55Q5SWW7 151 aa10.11□□□□□ -0.79
CPSF7-207ENST00000449811 SLC25A42Q86VD7 318 aa10.11□□□□□ -0.79
CPSF7-207ENST00000449811 SPAG8Q99932 426 aaPredicted RBP10.11□□□□□ -0.79
CPSF7-207ENST00000449811 ZNF430Q9H8G1 570 aaPredicted RBP10.11□□□□□ -0.79
CPSF7-207ENST00000449811 Q9N2K0 584 aa10.11□□□□□ -0.79
CPSF7-207ENST00000449811 FBXL7Q9UJT9 491 aa10.11□□□□□ -0.79
CPSF7-207ENST00000449811 ZNF257Q9Y2Q1 563 aa10.11□□□□□ -0.79
CPSF7-207ENST00000449811 PNMA8CA0A1B0GUJ8 204 aa10.1□□□□□ -0.79
CPSF7-207ENST00000449811 XRCC3O43542 346 aa10.1□□□□□ -0.79
CPSF7-207ENST00000449811 CREBL2O60519 120 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-207ENST00000449811 CRYZL1O95825 349 aa10.1□□□□□ -0.79
CPSF7-207ENST00000449811 FCGR2BP31994 310 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-207ENST00000449811 UNC119Q13432 240 aa10.1□□□□□ -0.79
CPSF7-207ENST00000449811 MED22Q15528 200 aa10.1□□□□□ -0.79
CPSF7-207ENST00000449811 ZNF585BQ52M93 769 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms