RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 PARP11Q9NR21 331 aa12.38□□□□□ -0.43
TOP3B-211ENST00000449704 KLK11Q9UBX7 282 aa12.38□□□□□ -0.43
TOP3B-211ENST00000449704 WSB1Q9Y6I7 421 aa12.38□□□□□ -0.43
TOP3B-211ENST00000449704 TRRAPQ9Y4A5 3859 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 M0QYG6 137 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 SPDEFO95238 335 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 OPN1MWP04001 364 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 OPN1MW2P0DN77 364 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 OPN1MW3P0DN78 364 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 VDAC1P21796 283 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 CX3CL1P78423 397 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 DGCR2P98153 550 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 IL18Q14116 193 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 TMEM177Q53S58 311 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 TREML4Q6UXN2 200 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 NDUFA11Q86Y39 141 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 MFSD4AQ8N468 514 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 ZBTB34Q8NCN2 500 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 ABHD5Q8WTS1 349 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 MTFP1Q9UDX5 166 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 WNK1Q9H4A3 2382 aa12.37□□□□□ -0.43
TOP3B-211ENST00000449704 SRRM4A7MD48 611 aaKnown RBP12.36□□□□□ -0.43
TOP3B-211ENST00000449704 ZNF701M0R085 212 aaPredicted RBP12.36□□□□□ -0.43
TOP3B-211ENST00000449704 ATP6V0E1O15342 81 aa12.36□□□□□ -0.43
TOP3B-211ENST00000449704 IGLV2-23P01705 113 aa12.36□□□□□ -0.43
TOP3B-211ENST00000449704 TNFSF8P32971 234 aa12.36□□□□□ -0.43
TOP3B-211ENST00000449704 EIF4EBP1Q13541 118 aaPredicted RBP12.36□□□□□ -0.43
TOP3B-211ENST00000449704 MSMO1Q15800 293 aa12.36□□□□□ -0.43
TOP3B-211ENST00000449704 ZNF660Q6AZW8 331 aaPredicted RBP12.36□□□□□ -0.43
TOP3B-211ENST00000449704 PYHIN1Q6K0P9 492 aa12.36□□□□□ -0.43
TOP3B-211ENST00000449704 ZNF66Q6ZN08 573 aa12.36□□□□□ -0.43
TOP3B-211ENST00000449704 MOB3AQ96BX8 217 aa12.36□□□□□ -0.43
TOP3B-211ENST00000449704 NXF2Q9GZY0 626 aaKnown RBP12.36□□□□□ -0.43
TOP3B-211ENST00000449704 TPSG1Q9NRR2 321 aa12.36□□□□□ -0.43
TOP3B-211ENST00000449704 TSSC4Q9Y5U2 329 aaPredicted RBP12.36□□□□□ -0.43
TOP3B-211ENST00000449704 A3GALT2U3KPV4 340 aa12.36□□□□□ -0.43
TOP3B-211ENST00000449704 G3V318 75 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 GABARAPH6UMI1 98 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 CA2P00918 260 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 CD3DP04234 171 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 IFNA6P05013 189 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 IGF1P05019 195 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 GNRHRP30968 328 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 GNB1P62873 340 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 MRPS10P82664 201 aaKnown RBP12.35□□□□□ -0.43
TOP3B-211ENST00000449704 VMA21Q3ZAQ7 101 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 ACTBL2Q562R1 376 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 TEX38Q6PEX7 206 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 ZNF818PQ6ZRF7 136 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 R3HDM4Q96D70 268 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 MMP27Q9H306 513 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 RABL2AQ9UBK7 228 aaPredicted RBP12.35□□□□□ -0.43
TOP3B-211ENST00000449704 RABL2BQ9UNT1 228 aa12.35□□□□□ -0.43
TOP3B-211ENST00000449704 NBEAL1Q6ZS30 2694 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 TRAV41A0A0B4J266 112 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 FABP12A6NFH5 140 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 ADARB2-AS1A8MUL3 147 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 CNIH1O95406 144 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 NDPQ00604 133 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 PJVKQ0ZLH3 352 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 ECSCRQ19T08 205 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 RNASE10Q5GAN6 216 aaKnown RBP12.34□□□□□ -0.43
TOP3B-211ENST00000449704 ZNF562Q6V9R5 426 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 IDO2Q6ZQW0 420 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 PPP1R27Q86WC6 154 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 COMMD1Q8N668 190 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 OR51H1Q8NH63 302 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 OR4S2Q8NH73 311 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 OSR1Q8TAX0 266 aaPredicted RBP12.34□□□□□ -0.43
TOP3B-211ENST00000449704 BORCS5Q969J3 196 aa12.34□□□□□ -0.43
TOP3B-211ENST00000449704 CRYGBP07316 175 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 S100A5P33763 92 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 KIR2DS2P43631 304 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 BRWD1-AS2P59051 145 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 UBE2KP61086 200 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 CATR1Q13166 79 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 FOXE3Q13461 319 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 FXYD3Q14802 87 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 CXorf66Q5JRM2 361 aaPredicted RBP12.33□□□□□ -0.44
TOP3B-211ENST00000449704 VAX1Q5SQQ9 334 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 AADACL3Q5VUY0 350 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 LCNL1Q6ZST4 164 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 SPAG16Q8N0X2 631 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 TMEM229BQ8NBD8 167 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 GRPEL2Q8TAA5 225 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 SMIM4Q8WVI0 70 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 DGCR14Q96DF8 476 aaKnown RBP12.33□□□□□ -0.44
TOP3B-211ENST00000449704 FAM103A1Q9BTL3 118 aaKnown RBP12.33□□□□□ -0.44
TOP3B-211ENST00000449704 TINAGL1Q9GZM7 467 aaPredicted RBP12.33□□□□□ -0.44
TOP3B-211ENST00000449704 FXYD6Q9H0Q3 95 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 NDUFA13Q9P0J0 144 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 FBXO7Q9Y3I1 522 aa12.33□□□□□ -0.44
TOP3B-211ENST00000449704 TET2Q6N021 2002 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-211ENST00000449704 DPPA5A6NC42 116 aa12.32□□□□□ -0.44
TOP3B-211ENST00000449704 GPR31O00270 319 aa12.32□□□□□ -0.44
TOP3B-211ENST00000449704 CTDSPLO15194 276 aa12.32□□□□□ -0.44
TOP3B-211ENST00000449704 RPLP1P05386 114 aaKnown RBP12.32□□□□□ -0.44
TOP3B-211ENST00000449704 ELANEP08246 267 aa12.32□□□□□ -0.44
TOP3B-211ENST00000449704 TAS2R19P59542 299 aa12.32□□□□□ -0.44
TOP3B-211ENST00000449704 CFHR3Q02985 330 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms