RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 ZNF645Q8N7E2 425 aa12.07□□□□□ -0.48
LIMS1-210ENST00000449684 OR5H6Q8NGV6 325 aa12.07□□□□□ -0.48
LIMS1-210ENST00000449684 MYOZ3Q8TDC0 251 aa12.07□□□□□ -0.48
LIMS1-210ENST00000449684 TPSG1Q9NRR2 321 aa12.07□□□□□ -0.48
LIMS1-210ENST00000449684 ANXA10Q9UJ72 324 aa12.07□□□□□ -0.48
LIMS1-210ENST00000449684 PRELID3BQ9Y3B1 194 aa12.07□□□□□ -0.48
LIMS1-210ENST00000449684 OR2W1Q9Y3N9 320 aa12.07□□□□□ -0.48
LIMS1-210ENST00000449684 A0A0A6YYH2 397 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 WI2-2373I1.2A0A1W2PRP0 233 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 A6NJ64 397 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 I3L521 148 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 RAMP3O60896 148 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 TMEM127O75204 238 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 CRYZL1O95825 349 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 EGR2P11161 476 aaPredicted RBP12.06□□□□□ -0.48
LIMS1-210ENST00000449684 DUTP33316 252 aaKnown RBP12.06□□□□□ -0.48
LIMS1-210ENST00000449684 RUNX1Q01196 453 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 DCTN2Q13561 401 aaKnown RBP12.06□□□□□ -0.48
LIMS1-210ENST00000449684 KIAA0141Q14154 515 aaPredicted RBP12.06□□□□□ -0.48
LIMS1-210ENST00000449684 TMEM177Q53S58 311 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 PHB2Q99623 299 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 SLA2Q9H6Q3 261 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 SPATA2Q9UM82 520 aa12.06□□□□□ -0.48
LIMS1-210ENST00000449684 SOX15O60248 233 aa12.05□□□□□ -0.48
LIMS1-210ENST00000449684 IGHV3-11P01762 117 aa12.05□□□□□ -0.48
LIMS1-210ENST00000449684 TRGV3P03979 118 aa12.05□□□□□ -0.48
LIMS1-210ENST00000449684 LSM3P62310 102 aaKnown RBP12.05□□□□□ -0.48
LIMS1-210ENST00000449684 FHL3Q13643 280 aa12.05□□□□□ -0.48
LIMS1-210ENST00000449684 C19orf54Q5BKX5 351 aa12.05□□□□□ -0.48
LIMS1-210ENST00000449684 KCTD9Q7L273 389 aa12.05□□□□□ -0.48
LIMS1-210ENST00000449684 BEST4Q8NFU0 473 aa12.05□□□□□ -0.48
LIMS1-210ENST00000449684 OR5T1Q8NG75 326 aa12.05□□□□□ -0.48
LIMS1-210ENST00000449684 S100A16Q96FQ6 103 aaKnown RBP12.05□□□□□ -0.48
LIMS1-210ENST00000449684 MRPS7Q9Y2R9 242 aaKnown RBP12.05□□□□□ -0.48
LIMS1-210ENST00000449684 LINC00473A8K010 186 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 LINC01619G3V211 115 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 ARPC1BO15143 372 aaKnown RBP12.04□□□□□ -0.48
LIMS1-210ENST00000449684 MPPED1O15442 326 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 SSX5O60225 188 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 FCGR3BO75015 233 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 ACTL6BO94805 426 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 IGLV2-23P01705 113 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 HLA-DQB1P01920 261 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 LGALS1P09382 135 aaKnown RBP12.04□□□□□ -0.48
LIMS1-210ENST00000449684 ECI1P42126 302 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 PJVKQ0ZLH3 352 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 TEX45Q8NA69 505 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 OSR1Q8TAX0 266 aaPredicted RBP12.04□□□□□ -0.48
LIMS1-210ENST00000449684 SLC25A38Q96DW6 304 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 C5orf30Q96GV9 206 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 TMEM68Q96MH6 324 aa12.04□□□□□ -0.48
LIMS1-210ENST00000449684 ALX4Q9H161 411 aaPredicted RBP12.04□□□□□ -0.48
LIMS1-210ENST00000449684 RBMX2Q9Y388 322 aaKnown RBP12.04□□□□□ -0.48
LIMS1-210ENST00000449684 C13orf42A0A1B0GVH6 325 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 OVOL1O14753 267 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 CREBL2O60519 120 aaPredicted RBP12.03□□□□□ -0.48
LIMS1-210ENST00000449684 CBX5P45973 191 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 TNXAQ16473 311 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 OR2B11Q5JQS5 317 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 GVQW1Q8N7I0 195 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 POC5Q8NA72 575 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 TCTEX1D2Q8WW35 142 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 ACOT12Q8WYK0 555 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 DCUN1D4Q92564 292 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 AUNIPQ9H7T9 357 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 IFT46Q9NQC8 304 aa12.03□□□□□ -0.48
LIMS1-210ENST00000449684 A0A0G2JLM5 398 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 SRRM4A7MD48 611 aaKnown RBP12.02□□□□□ -0.49
LIMS1-210ENST00000449684 LY86O95711 162 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 FCER2P06734 321 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 CRYGBP07316 175 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 TGFBR1P36897 503 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 RPS19P39019 145 aaKnown RBP12.02□□□□□ -0.49
LIMS1-210ENST00000449684 INSL3P51460 131 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 UBE2KP61086 200 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 CD69Q07108 199 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 UBE2NLQ5JXB2 153 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 IDO2Q6ZQW0 420 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 HOGA1Q86XE5 327 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 SECTM1Q8WVN6 248 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 DDB2Q92466 427 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 YIPF6Q96EC8 236 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 HSD17B10Q99714 261 aaKnown RBP12.02□□□□□ -0.49
LIMS1-210ENST00000449684 COA4Q9NYJ1 87 aa12.02□□□□□ -0.49
LIMS1-210ENST00000449684 IGHV4OR15-8A0A075B7B6 117 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 A0A087WW49 117 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 MSGN1A6NI15 193 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 H3BUA1 57 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 SAP30O75446 220 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 HSPB1P04792 205 aaKnown RBP12.01□□□□□ -0.49
LIMS1-210ENST00000449684 APELAP0DMC3 54 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 FCGR2CP31995 323 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 SLURP1P55000 103 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 SAMD12Q8N8I0 201 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 OR4S2Q8NH73 311 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 RHOVQ96L33 236 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 TAS2R8Q9NYW2 309 aa12.01□□□□□ -0.49
LIMS1-210ENST00000449684 IGKV1D-13A0A0B4J2D9 117 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 MEIS3P1A6NDR6 274 aa12□□□□□ -0.49
LIMS1-210ENST00000449684 XRCC3O43542 346 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms