RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 RTL8BQ17RB0 113 aa14.64□□□□□ -0.07
HDAC4-203ENST00000445704 ZNF562Q6V9R5 426 aa14.64□□□□□ -0.07
HDAC4-203ENST00000445704 ABHD5Q8WTS1 349 aa14.64□□□□□ -0.07
HDAC4-203ENST00000445704 COMMD3Q9UBI1 195 aa14.64□□□□□ -0.07
HDAC4-203ENST00000445704 NOTCH3Q9UM47 2321 aa14.64□□□□□ -0.07
HDAC4-203ENST00000445704 SHOXO15266 292 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 CRYZL1O95825 349 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 RRASP10301 218 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 AADACP22760 399 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 FCGR2CP31995 323 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 CBX5P45973 191 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 LGALS7P47929 136 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 EIF4EBP1Q13541 118 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-203ENST00000445704 PPP1R27Q86WC6 154 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 CASTOR1Q8WTX7 329 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 C4orf3Q8WVX3 66 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 GNB4Q9HAV0 340 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 ANAPC10Q9UM13 185 aa14.63□□□□□ -0.07
HDAC4-203ENST00000445704 CCL24O00175 119 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 CBX3Q13185 183 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 FXYD3Q14802 87 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 MRGPRG-AS1Q2M3A8 158 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 OR2B11Q5JQS5 317 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 FOXB2Q5VYV0 432 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 TMEM65Q6PI78 240 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 KCTD9Q7L273 389 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 ZNF491Q8N8L2 437 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 LFNGQ8NES3 379 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 ARPC1AQ92747 370 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 RCC1LQ96I51 464 aaKnown RBP14.62□□□□□ -0.07
HDAC4-203ENST00000445704 GPHA2Q96T91 129 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 NECAP2Q9NVZ3 263 aa14.62□□□□□ -0.07
HDAC4-203ENST00000445704 FOXA2Q9Y261 457 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-203ENST00000445704 HPGDSO60760 199 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 SLC22A5O76082 557 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 PPYP01298 95 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 RAB9AP51151 201 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 RORCP51449 518 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 CDK10Q15131 360 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 UNQ5815/PRO19632Q6UWF5 114 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 OVCH2Q7RTZ1 564 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 OR5AP2Q8NGF4 316 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 GRPEL2Q8TAA5 225 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 UBE2E2Q96LR5 201 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 IFT46Q9NQC8 304 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 CCL28Q9NRJ3 127 aa14.61□□□□□ -0.07
HDAC4-203ENST00000445704 PRKDCP78527 4128 aaKnown RBP14.61□□□□□ -0.07
HDAC4-203ENST00000445704 FCGR3BO75015 233 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 APOA1P02647 267 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 ELK1P19419 428 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 BRWD1-AS2P59051 145 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 GNB1P62873 340 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 AKIRIN2Q53H80 203 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 ACTBL2Q562R1 376 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 IDO2Q6ZQW0 420 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 GPR141Q7Z602 305 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 TCTEX1D1Q8N7M0 179 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 SECTM1Q8WVN6 248 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 ACOT12Q8WYK0 555 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 CMTM3Q96MX0 182 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 OR5B12Q96R08 314 aa14.6□□□□□ -0.07
HDAC4-203ENST00000445704 I3L521 148 aa14.59□□□□□ -0.07
HDAC4-203ENST00000445704 UBE2KP61086 200 aa14.59□□□□□ -0.07
HDAC4-203ENST00000445704 TMEM267Q0VDI3 215 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-203ENST00000445704 FHL3Q13643 280 aa14.59□□□□□ -0.07
HDAC4-203ENST00000445704 OSR1Q8TAX0 266 aaPredicted RBP14.59□□□□□ -0.07
HDAC4-203ENST00000445704 TCTEX1D2Q8WW35 142 aa14.59□□□□□ -0.07
HDAC4-203ENST00000445704 HSD17B10Q99714 261 aaKnown RBP14.59□□□□□ -0.07
HDAC4-203ENST00000445704 TAS2R8Q9NYW2 309 aa14.59□□□□□ -0.07
HDAC4-203ENST00000445704 VSIG4Q9Y279 399 aa14.59□□□□□ -0.07
HDAC4-203ENST00000445704 TNFSF12O43508 249 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 CNIH1O95406 144 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 DUS4LO95620 317 aaKnown RBP14.58□□□□□ -0.08
HDAC4-203ENST00000445704 SAA1P0DJI8 122 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-203ENST00000445704 NAT1P18440 290 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 PRSS3P35030 304 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 RAB25P57735 213 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 FXYD4P59646 89 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 VMA21Q3ZAQ7 101 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 ASPHD1Q5U4P2 390 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 MFSD4AQ8N468 514 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 TEX45Q8NA69 505 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 OR5M8Q8NGP6 311 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 GIMAP1Q8WWP7 306 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 SLC5A7Q9GZV3 580 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 AURKAIP1Q9NWT8 199 aaPredicted RBP14.58□□□□□ -0.08
HDAC4-203ENST00000445704 EHFQ9NZC4 300 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 MRPS7Q9Y2R9 242 aaKnown RBP14.58□□□□□ -0.08
HDAC4-203ENST00000445704 PRELID3BQ9Y3B1 194 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 DNAH3Q8TD57 4116 aa14.58□□□□□ -0.08
HDAC4-203ENST00000445704 PMP2P02689 132 aa14.57□□□□□ -0.08
HDAC4-203ENST00000445704 ZNF182P17025 639 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-203ENST00000445704 HOXD3P31249 432 aaPredicted RBP14.57□□□□□ -0.08
HDAC4-203ENST00000445704 RFX2P48378 723 aa14.57□□□□□ -0.08
HDAC4-203ENST00000445704 KRTAP10-11P60412 298 aa14.57□□□□□ -0.08
HDAC4-203ENST00000445704 RUNX1Q01196 453 aa14.57□□□□□ -0.08
HDAC4-203ENST00000445704 SPCS2Q15005 226 aa14.57□□□□□ -0.08
HDAC4-203ENST00000445704 MSMO1Q15800 293 aa14.57□□□□□ -0.08
HDAC4-203ENST00000445704 PRSS8Q16651 343 aa14.57□□□□□ -0.08
HDAC4-203ENST00000445704 SNX29P2Q8IUI4 249 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms