RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 OR52E5Q8NH55 327 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 OR4A16Q8NH70 328 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 SCGB1C1Q8TD33 95 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 DTD1Q8TEA8 209 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 LEAP2Q969E1 77 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 CLCC1Q96S66 551 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 RAB1BQ9H0U4 201 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 SH3BGRL3Q9H299 93 aa12.9□□□□□ -0.34
SNX13-204ENST00000444712 DVL1O14640 695 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 TSPAN15O95858 294 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 IGHV3-7P01780 117 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 OR8U8P0C7N1 319 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 METTL15P1P0C7V9 234 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 GNG10P50151 68 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 TAGLNQ01995 201 aaKnown RBP12.89□□□□□ -0.35
SNX13-204ENST00000444712 ATP6V1FQ16864 119 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 C4orf17Q53FE4 359 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 TMEM182Q6ZP80 229 aaPredicted RBP12.89□□□□□ -0.35
SNX13-204ENST00000444712 LFNGQ8NES3 379 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 ZNF251Q9BRH9 671 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 AIFM2Q9BRQ8 373 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 PLA2G2EQ9NZK7 142 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 GPR37O15354 613 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 CRYZL1O95825 349 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 RPP30P78346 268 aaKnown RBP12.89□□□□□ -0.35
SNX13-204ENST00000444712 ZNF616Q08AN1 781 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 CDSNQ15517 529 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 TMEM200BQ69YZ2 307 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 FAM71F2Q6NXP2 309 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 LYPD2Q6UXB3 125 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 CBLN4Q9NTU7 201 aa12.89□□□□□ -0.35
SNX13-204ENST00000444712 DIDO1Q9BTC0 2240 aaKnown RBP12.89□□□□□ -0.35
SNX13-204ENST00000444712 TMEM218A2RU14 115 aa12.88□□□□□ -0.35
SNX13-204ENST00000444712 CEBPZOSA8MTT3 80 aa12.88□□□□□ -0.35
SNX13-204ENST00000444712 HRASP01112 189 aa12.88□□□□□ -0.35
SNX13-204ENST00000444712 SPCS3P61009 180 aa12.88□□□□□ -0.35
SNX13-204ENST00000444712 RTL8BQ17RB0 113 aa12.88□□□□□ -0.35
SNX13-204ENST00000444712 ZNF525Q8N782 197 aa12.88□□□□□ -0.35
SNX13-204ENST00000444712 PINX1Q96BK5 328 aaKnown RBP12.88□□□□□ -0.35
SNX13-204ENST00000444712 CTSZQ9UBR2 303 aa12.88□□□□□ -0.35
SNX13-204ENST00000444712 A0A1W2PPE3 182 aa12.88□□□□□ -0.35
SNX13-204ENST00000444712 LINC00205P59089 165 aa12.88□□□□□ -0.35
SNX13-204ENST00000444712 PDLIM3Q53GG5 364 aaPredicted RBP12.88□□□□□ -0.35
SNX13-204ENST00000444712 AKR1C8PQ5T2L2 129 aa12.88□□□□□ -0.35
SNX13-204ENST00000444712 PSMG3Q9BT73 122 aaPredicted RBP12.88□□□□□ -0.35
SNX13-204ENST00000444712 TREM1Q9NP99 234 aa12.88□□□□□ -0.35
SNX13-204ENST00000444712 A0A1W2PPH5 198 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 BTBD17A6NE02 478 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 MMP23AO75900 390 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 OR9G9P0C7N8 305 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 M6PRP20645 277 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 SLC38A11Q08AI6 406 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 POU2AF1Q16633 256 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 ZNF833PQ6ZTB9 187 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 ZNF429Q86V71 674 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 LINC00311Q8N616 119 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 NEU4Q8WWR8 484 aaPredicted RBP12.87□□□□□ -0.35
SNX13-204ENST00000444712 NARFLQ9H6Q4 476 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 TMEM140Q9NV12 185 aa12.87□□□□□ -0.35
SNX13-204ENST00000444712 IFNA17P01571 189 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 CCL3L1P16619 93 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 DVL1P1P54792 670 aaPredicted RBP12.86□□□□□ -0.35
SNX13-204ENST00000444712 TMEM155Q4W5P6 130 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 FAM213BQ8TBF2 198 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 ZNF596Q8TC21 504 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 SPTA1P02549 2419 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 A0A087X0M5 115 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 A0A1B0GX30 115 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 PPIHO43447 177 aaKnown RBP12.86□□□□□ -0.35
SNX13-204ENST00000444712 IGHV2-70P01814 119 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 APOC3P02656 99 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 RAB2AP61019 212 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 LRRC75BQ2VPJ9 315 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 ZNF383Q8NA42 475 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 OR10P1Q8NGE3 313 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 PBDC1Q9BVG4 233 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 QTRT1Q9BXR0 403 aaKnown RBP12.86□□□□□ -0.35
SNX13-204ENST00000444712 HIPK2Q9H2X6 1198 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 UQCC1Q9NVA1 299 aa12.86□□□□□ -0.35
SNX13-204ENST00000444712 RALYQ9UKM9 306 aaKnown RBP12.86□□□□□ -0.35
SNX13-204ENST00000444712 FCN3O75636 299 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 APOA2P02652 100 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 SNCAP37840 140 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 SERF2P84101 59 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 RELBQ01201 579 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 TLE4Q04727 773 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 UTF1Q5T230 341 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 C1orf229Q6ZS94 237 aaPredicted RBP12.85□□□□□ -0.35
SNX13-204ENST00000444712 SSX9Q7RTT3 188 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 HAPLN4Q86UW8 402 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 PUSL1Q8N0Z8 303 aaKnown RBP12.85□□□□□ -0.35
SNX13-204ENST00000444712 TMEM186Q96B77 213 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 RHOVQ96L33 236 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 TMEM147Q9BVK8 224 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 SEC11CQ9BY50 192 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 SLC35D1Q9NTN3 355 aa12.85□□□□□ -0.35
SNX13-204ENST00000444712 RNASEK-C17orf49H0YIS7 233 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 HBE1P02100 147 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 COL8A2P25067 703 aa12.84□□□□□ -0.35
SNX13-204ENST00000444712 OR2B8PP59922 312 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms