RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 BVESQ8NE79 360 aa10.54□□□□□ -0.72
PTPRE-203ENST00000442830 OSR1Q8TAX0 266 aaPredicted RBP10.54□□□□□ -0.72
PTPRE-203ENST00000442830 FAM3DQ96BQ1 224 aa10.54□□□□□ -0.72
PTPRE-203ENST00000442830 RAB3CQ96E17 227 aa10.54□□□□□ -0.72
PTPRE-203ENST00000442830 CYYR1Q96J86 154 aa10.54□□□□□ -0.72
PTPRE-203ENST00000442830 ACOT13Q9NPJ3 140 aa10.54□□□□□ -0.72
PTPRE-203ENST00000442830 COA4Q9NYJ1 87 aa10.54□□□□□ -0.72
PTPRE-203ENST00000442830 RBM7Q9Y580 266 aaKnown RBP10.54□□□□□ -0.72
PTPRE-203ENST00000442830 V9GY05 133 aa10.54□□□□□ -0.72
PTPRE-203ENST00000442830 TRBV6-7A0A0A0MS04 114 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 IGKV1-6A0A0C4DH72 117 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 SHISA3A0PJX4 238 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 PDCD5O14737 125 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 TUSC2O75896 110 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 JTBO76095 146 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 ACTL6BO94805 426 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 OR9G9P0C7N8 305 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 UBE2KP61086 200 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 MLLT11Q13015 90 aaPredicted RBP10.53□□□□□ -0.72
PTPRE-203ENST00000442830 SPIN2AQ99865 258 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 SPIN2BQ9BPZ2 258 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 GINS4Q9BRT9 223 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 SDHAF2Q9NX18 166 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 CSMD3Q7Z407 3707 aa10.53□□□□□ -0.72
PTPRE-203ENST00000442830 BET1O15155 118 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 MPPED1O15442 326 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 SLC22A5O76082 557 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 FCGR3AP08637 254 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 CALRP27797 417 aaKnown RBP10.52□□□□□ -0.73
PTPRE-203ENST00000442830 IRF3Q14653 427 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 HAGHQ16775 308 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 C2orf76Q3KRA6 126 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 ZFAND6Q6FIF0 208 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 Q6ZS49 121 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 HAPLN4Q86UW8 402 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 ADAD2Q8NCV1 583 aaKnown RBP10.52□□□□□ -0.73
PTPRE-203ENST00000442830 TMEM203Q969S6 136 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 SLC2A8Q9NY64 477 aa10.52□□□□□ -0.73
PTPRE-203ENST00000442830 NKX1-2Q9UD57 310 aaPredicted RBP10.52□□□□□ -0.73
PTPRE-203ENST00000442830 AK6Q9Y3D8 172 aaKnown RBP10.52□□□□□ -0.73
PTPRE-203ENST00000442830 METTL21EPA6NDL7 271 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 TPPPO94811 219 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 CSN3P07498 182 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 HSMCR30P0CW71 290 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 RAB6AP20340 208 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 TALDO1P37837 337 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 SSBP2P81877 361 aaPredicted RBP10.51□□□□□ -0.73
PTPRE-203ENST00000442830 DYRK1AQ13627 763 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 TNXAQ16473 311 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 PRSS8Q16651 343 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 PLAC9Q5JTB6 97 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 IL34Q6ZMJ4 242 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 TMEM91Q6ZNR0 172 aa10.51□□□□□ -0.73
PTPRE-203ENST00000442830 THAP7Q9BT49 309 aaPredicted RBP10.51□□□□□ -0.73
PTPRE-203ENST00000442830 MRPS7Q9Y2R9 242 aaKnown RBP10.51□□□□□ -0.73
PTPRE-203ENST00000442830 MSGN1A6NI15 193 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 RGS10O43665 173 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 ATP5G2Q06055 141 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 PJVKQ0ZLH3 352 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 EXOSC2Q13868 293 aaKnown RBP10.5□□□□□ -0.73
PTPRE-203ENST00000442830 MMD2Q8IY49 270 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 NECAP1Q8NC96 275 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 OR10R2Q8NGX6 335 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 VSTM2AQ8TAG5 236 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 DYNLRB2Q8TF09 96 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 SRSF12Q8WXF0 261 aaKnown RBP10.5□□□□□ -0.73
PTPRE-203ENST00000442830 GFI1Q99684 422 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 TECRQ9NZ01 308 aaKnown RBP10.5□□□□□ -0.73
PTPRE-203ENST00000442830 PRELID3BQ9Y3B1 194 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 CEPT1Q9Y6K0 416 aa10.5□□□□□ -0.73
PTPRE-203ENST00000442830 RYR2Q92736 4967 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 TRBV9A0A0B4J1U6 114 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 TRAV1-2A0A0B4J238 106 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 TMEM272A0A1B0GTI8 110 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 CRYZL1O95825 349 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 CTXN2P0C2S0 81 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 HIST1H1DP16402 221 aaKnown RBP10.49□□□□□ -0.73
PTPRE-203ENST00000442830 CD36P16671 472 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 DTYMKP23919 212 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 MYL9P24844 172 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 DUTP33316 252 aaKnown RBP10.49□□□□□ -0.73
PTPRE-203ENST00000442830 LINC00205P59089 165 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 RPS25P62851 125 aaKnown RBP10.49□□□□□ -0.73
PTPRE-203ENST00000442830 RHOGP84095 191 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 CDK10Q15131 360 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 IGSF11Q5DX21 431 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 PRSS48Q7RTY5 328 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 ACOT12Q8WYK0 555 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 DDB2Q92466 427 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 DUSP21Q9H596 190 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 SACSQ9NZJ4 4579 aa10.49□□□□□ -0.73
PTPRE-203ENST00000442830 STARD9Q9P2P6 4700 aa10.48□□□□□ -0.73
PTPRE-203ENST00000442830 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.48□□□□□ -0.73
PTPRE-203ENST00000442830 MFNGO00587 321 aa10.48□□□□□ -0.73
PTPRE-203ENST00000442830 SCGNO76038 276 aa10.48□□□□□ -0.73
PTPRE-203ENST00000442830 DHFRP00374 187 aa10.48□□□□□ -0.73
PTPRE-203ENST00000442830 GSTT2P0CG29 244 aa10.48□□□□□ -0.73
PTPRE-203ENST00000442830 GSTT2BP0CG30 244 aa10.48□□□□□ -0.73
PTPRE-203ENST00000442830 MECP2P51608 486 aaKnown RBP10.48□□□□□ -0.73
PTPRE-203ENST00000442830 CLDN12P56749 244 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms