RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 CCL28Q9NRJ3 127 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 METTL1Q9UBP6 276 aaKnown RBP11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 KLK11Q9UBX7 282 aa11.85□□□□□ -0.51
CSNK1E-210ENST00000442216 SHOXO15266 292 aa11.84□□□□□ -0.51
CSNK1E-210ENST00000442216 IGLV2-23P01705 113 aa11.84□□□□□ -0.51
CSNK1E-210ENST00000442216 CSF1P09603 554 aa11.84□□□□□ -0.51
CSNK1E-210ENST00000442216 CRIP2P52943 208 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-210ENST00000442216 FXYD4P59646 89 aa11.84□□□□□ -0.51
CSNK1E-210ENST00000442216 VAX1Q5SQQ9 334 aa11.84□□□□□ -0.51
CSNK1E-210ENST00000442216 ZNF562Q6V9R5 426 aa11.84□□□□□ -0.51
CSNK1E-210ENST00000442216 MFSD4AQ8N468 514 aa11.84□□□□□ -0.51
CSNK1E-210ENST00000442216 CITED2Q99967 270 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-210ENST00000442216 TSSC4Q9Y5U2 329 aaPredicted RBP11.84□□□□□ -0.51
CSNK1E-210ENST00000442216 CRYZL1O95825 349 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 CRYGBP07316 175 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 VDAC1P21796 283 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 KIR2DS2P43631 304 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 TSPAN5P62079 268 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 RPL30P62888 115 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 CATR1Q13166 79 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 IL18Q14116 193 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 TCTEX1D4Q5JR98 221 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 LPCAT3Q6P1A2 487 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 TEX38Q6PEX7 206 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 TREML4Q6UXN2 200 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 PPP1R27Q86WC6 154 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 TEX45Q8NA69 505 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 SMIM4Q8WVI0 70 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 DGCR14Q96DF8 476 aaKnown RBP11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 LINC00527Q9UJ94 153 aa11.83□□□□□ -0.52
CSNK1E-210ENST00000442216 WNK1Q9H4A3 2382 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 TCRBV4S1A1TA0A5B7 111 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 ADARB2-AS1A8MUL3 147 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 ATP6V0E1O15342 81 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 SLC25A17O43808 307 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 FCGR3BO75015 233 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 ELANEP08246 267 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 GNRHRP30968 328 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 TNFSF8P32971 234 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 TAS2R19P59542 299 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 UBE2KP61086 200 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 CX3CL1P78423 397 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 CFHR3Q02985 330 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 VMA21Q3ZAQ7 101 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 C10orf99Q6UWK7 81 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 ZNF818PQ6ZRF7 136 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 ZNF329Q86UD4 541 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 TMEM17Q86X19 198 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 ARRDC1Q8N5I2 433 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 TCTEX1D1Q8N7M0 179 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 TMEM229BQ8NBD8 167 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 OR4S2Q8NH73 311 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 TCTEX1D2Q8WW35 142 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 SOSTQ9BQB4 213 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 DCUN1D5Q9BTE7 237 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 ZFP57Q9NU63 452 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 TAS2R8Q9NYW2 309 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 TNCP24821 2201 aa11.82□□□□□ -0.52
CSNK1E-210ENST00000442216 SRRM4A7MD48 611 aaKnown RBP11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 FCN1O00602 326 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 RBFOX2O43251 390 aaKnown RBP eCLIP11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 GSTZ1O43708 216 aaPredicted RBP11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 IGHG4P01861 327 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 CD74P04233 296 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 IFNA6P05013 189 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 SLC6A1P30531 599 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 S100A5P33763 92 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 UCP3P55916 312 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 DGCR2P98153 550 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 TMEM267Q0VDI3 215 aaPredicted RBP11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 FOXE3Q13461 319 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 RNASE12Q5GAN4 147 aaKnown RBP11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 RNASE10Q5GAN6 216 aaKnown RBP11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 CMTM1Q8IZ96 169 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 RNF152Q8N8N0 203 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 OR4F17Q8NGA8 305 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 OR4F4Q96R69 305 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 AIFM2Q9BRQ8 373 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 FXYD6Q9H0Q3 95 aa11.81□□□□□ -0.52
CSNK1E-210ENST00000442216 TRAV41A0A0B4J266 112 aa11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 FABP12A6NFH5 140 aa11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 GPR31O00270 319 aa11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 CREBL2O60519 120 aaPredicted RBP11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 CA2P00918 260 aa11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 CD3DP04234 171 aa11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 PTBP1P26599 531 aaKnown RBP eCLIP11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 PPIFP30405 207 aaKnown RBP11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 BRWD1-AS2P59051 145 aa11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 NSUN5P1Q3KNT7 163 aa11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 CXorf66Q5JRM2 361 aaPredicted RBP11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 VSTM2AQ8TAG5 236 aa11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 CD300LFQ8TDQ1 290 aa11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 PARP11Q9NR21 331 aa11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 NUBP2Q9Y5Y2 271 aa11.8□□□□□ -0.52
CSNK1E-210ENST00000442216 TNFSF12O43508 249 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 TSPAN15O95858 294 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 HRASP01112 189 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 S100GP29377 79 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 NDPQ00604 133 aa11.79□□□□□ -0.52
CSNK1E-210ENST00000442216 AKIRIN2Q53H80 203 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 185.9 ms