RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 HPRT1P00492 218 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 CD1BP29016 333 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 BRS3P32247 399 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 LPAR6P43657 344 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 HABP2Q14520 560 aaPredicted RBP16.69■□□□□ 0.26
CHD3-204ENST00000439235 ANKRD55Q3KP44 614 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 ZNF695Q8IW36 515 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 LRTM2Q8N967 370 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 TMEM56Q96MV1 263 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 COMMD9Q9P000 198 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 TMEM56-RWDD3S4R434 201 aa16.69■□□□□ 0.26
CHD3-204ENST00000439235 IGHV3-72A0A0B4J1Y9 119 aa16.68■□□□□ 0.26
CHD3-204ENST00000439235 SSNA1O43805 119 aa16.68■□□□□ 0.26
CHD3-204ENST00000439235 RAMP3O60896 148 aa16.68■□□□□ 0.26
CHD3-204ENST00000439235 CDS2O95674 445 aa16.68■□□□□ 0.26
CHD3-204ENST00000439235 SRP14P37108 136 aaKnown RBP16.68■□□□□ 0.26
CHD3-204ENST00000439235 BRWD1-AS2P59051 145 aa16.68■□□□□ 0.26
CHD3-204ENST00000439235 ZNF585BQ52M93 769 aa16.68■□□□□ 0.26
CHD3-204ENST00000439235 TMEM268Q5VZI3 342 aa16.68■□□□□ 0.26
CHD3-204ENST00000439235 CFHR4Q92496 578 aa16.68■□□□□ 0.26
CHD3-204ENST00000439235 RBPMSQ93062 196 aaKnown RBP16.68■□□□□ 0.26
CHD3-204ENST00000439235 MEGF9Q9H1U4 602 aa16.68■□□□□ 0.26
CHD3-204ENST00000439235 PLEKHA2Q9HB19 425 aa16.68■□□□□ 0.26
CHD3-204ENST00000439235 PRR13Q9NZ81 148 aa16.68■□□□□ 0.26
CHD3-204ENST00000439235 AKAP9Q99996 3911 aa16.67■□□□□ 0.26
CHD3-204ENST00000439235 VPS13CQ709C8 3753 aa16.67■□□□□ 0.26
CHD3-204ENST00000439235 DUXBA0A1W2PPF3 345 aa16.67■□□□□ 0.26
CHD3-204ENST00000439235 S1PR2O95136 353 aa16.67■□□□□ 0.26
CHD3-204ENST00000439235 CRYZL1O95825 349 aa16.67■□□□□ 0.26
CHD3-204ENST00000439235 CLEC9AQ6UXN8 241 aa16.67■□□□□ 0.26
CHD3-204ENST00000439235 UXS1Q8NBZ7 420 aa16.67■□□□□ 0.26
CHD3-204ENST00000439235 OR4C13Q8NGP0 309 aa16.67■□□□□ 0.26
CHD3-204ENST00000439235 FLYWCH2Q96CP2 140 aaKnown RBP16.67■□□□□ 0.26
CHD3-204ENST00000439235 SMR3AQ99954 134 aa16.67■□□□□ 0.26
CHD3-204ENST00000439235 WNK2Q9Y3S1 2297 aa16.67■□□□□ 0.26
CHD3-204ENST00000439235 VENTXO95231 258 aa16.66■□□□□ 0.26
CHD3-204ENST00000439235 DYNLT3P51808 116 aa16.66■□□□□ 0.26
CHD3-204ENST00000439235 TMEM177Q53S58 311 aa16.66■□□□□ 0.26
CHD3-204ENST00000439235 LIN54Q6MZP7 749 aa16.66■□□□□ 0.26
CHD3-204ENST00000439235 SELENOHQ8IZQ5 122 aaKnown RBP16.66■□□□□ 0.26
CHD3-204ENST00000439235 LHFPL5Q8TAF8 219 aa16.66■□□□□ 0.26
CHD3-204ENST00000439235 OSR1Q8TAX0 266 aaPredicted RBP16.66■□□□□ 0.26
CHD3-204ENST00000439235 AIFM2Q9BRQ8 373 aa16.66■□□□□ 0.26
CHD3-204ENST00000439235 MED28Q9H204 178 aa16.66■□□□□ 0.26
CHD3-204ENST00000439235 hCG_2014768A0A024R1R8 64 aa16.65■□□□□ 0.26
CHD3-204ENST00000439235 VGLL3A8MV65 326 aa16.65■□□□□ 0.26
CHD3-204ENST00000439235 IGKV1-16P04430 117 aa16.65■□□□□ 0.26
CHD3-204ENST00000439235 PAX6P26367 422 aa16.65■□□□□ 0.26
CHD3-204ENST00000439235 AKR1C2P52895 323 aa16.65■□□□□ 0.26
CHD3-204ENST00000439235 ERVK-16P61578 105 aa16.65■□□□□ 0.26
CHD3-204ENST00000439235 SCGB2A2Q13296 93 aa16.65■□□□□ 0.26
CHD3-204ENST00000439235 AANATQ16613 207 aa16.65■□□□□ 0.26
CHD3-204ENST00000439235 IL17RELQ6ZVW7 336 aa16.65■□□□□ 0.26
CHD3-204ENST00000439235 SLC35G3Q8N808 338 aa16.65■□□□□ 0.26
CHD3-204ENST00000439235 RNASE11Q8TAA1 199 aaKnown RBP16.65■□□□□ 0.26
CHD3-204ENST00000439235 HARBI1Q96MB7 349 aa16.65■□□□□ 0.26
CHD3-204ENST00000439235 SHOXO15266 292 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 MOSP00540 346 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 HRASP01112 189 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 IGKV1-39P01597 117 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 IGKV1D-39P04432 117 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 SNRNP70P08621 437 aaKnown RBP16.64■□□□□ 0.25
CHD3-204ENST00000439235 FAM106CPP0CH98 169 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 NQO2P16083 231 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 RRAS2P62070 204 aaPredicted RBP16.64■□□□□ 0.25
CHD3-204ENST00000439235 RPS16P62249 146 aaKnown RBP16.64■□□□□ 0.25
CHD3-204ENST00000439235 LRRC75BQ2VPJ9 315 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 THNSL2Q86YJ6 484 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 OR2T10Q8NGZ9 312 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 R3HDM4Q96D70 268 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 RNF5Q99942 180 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 RAB18Q9NP72 206 aa16.64■□□□□ 0.25
CHD3-204ENST00000439235 F8P00451 2351 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 DBX1A6NMT0 343 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 FAM90A9PA6NNJ1 464 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 IFNA21P01568 189 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 IGKV1D-33P01593 117 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 IGKV1-33P01594 117 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 VDAC1P21796 283 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 LGALS7P47929 136 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 HES1Q14469 280 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 DEFB112Q30KQ8 113 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 BCL6BQ8N143 479 aaPredicted RBP16.63■□□□□ 0.25
CHD3-204ENST00000439235 RRNAD1Q96FB5 475 aaKnown RBP16.63■□□□□ 0.25
CHD3-204ENST00000439235 TMED3Q9Y3Q3 217 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 ABCA1O95477 2261 aa16.63■□□□□ 0.25
CHD3-204ENST00000439235 FLNAP21333 2647 aaKnown RBP16.63■□□□□ 0.25
CHD3-204ENST00000439235 A0A1B0GVG6 124 aa16.62■□□□□ 0.25
CHD3-204ENST00000439235 MARCH11A6NNE9 402 aa16.62■□□□□ 0.25
CHD3-204ENST00000439235 HOXB5P09067 269 aa16.62■□□□□ 0.25
CHD3-204ENST00000439235 EBI3Q14213 229 aa16.62■□□□□ 0.25
CHD3-204ENST00000439235 LYZL2Q7Z4W2 148 aa16.62■□□□□ 0.25
CHD3-204ENST00000439235 FAM219AQ8IW50 185 aa16.62■□□□□ 0.25
CHD3-204ENST00000439235 DMBX1Q8NFW5 382 aa16.62■□□□□ 0.25
CHD3-204ENST00000439235 C22orf15Q8WYQ4 148 aa16.62■□□□□ 0.25
CHD3-204ENST00000439235 LSM10Q969L4 123 aaKnown RBP16.62■□□□□ 0.25
CHD3-204ENST00000439235 TSNAXQ99598 290 aaKnown RBP16.62■□□□□ 0.25
CHD3-204ENST00000439235 MGAT4CQ9UBM8 478 aa16.62■□□□□ 0.25
CHD3-204ENST00000439235 CDC42EP3Q9UKI2 254 aa16.62■□□□□ 0.25
CHD3-204ENST00000439235 SOX21Q9Y651 276 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms